Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005339.1 Hibiscus syriacus cultivar Beakdansim tig00012091_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  85691

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8853--8896
2
22.0
2
85
0
61
56
0
0
43
0.99
8853--8901
20
2.5
20
86
3
64
59
0
0
40
0.98
14409--14433
11
2.3
11
100
0
50
28
44
20
8
1.79
15318--15370
27
2.0
27
88
0
79
47
7
5
39
1.56
27023--27113
30
3.0
29
83
4
101
38
12
12
37
1.80
29830--29892
33
2.0
32
93
6
110
14
9
33
42
1.78
35264--35303
19
2.1
19
90
0
62
32
2
15
50
1.57
38000--38066
26
2.5
26
83
9
73
37
4
0
58
1.19
45269--45350
35
2.3
35
84
12
98
39
0
2
58
1.11
47071--47118
21
2.3
21
85
0
60
25
39
12
22
1.89
47122--47215
21
4.5
21
92
5
129
18
35
26
20
1.95
47737--47832
33
2.9
33
84
1
120
55
4
3
37
1.35
48219--48697
126
3.8
126
99
0
940
32
20
25
21
1.97
48764--48804
8
5.2
8
82
5
57
36
29
0
34
1.58
69645--69684
18
2.2
18
90
0
62
22
15
32
30
1.94
71163--71203
18
2.3
18
91
4
66
63
2
4
29
1.28
71253--71281
10
2.9
10
100
0
58
48
0
31
20
1.50
76166--76297
67
2.0
67
89
3
203
34
13
10
41
1.79
81279--81314
2
18.0
2
100
0
72
50
0
0
50
1.00
82525--82834
156
2.0
156
89
6
477
39
11
8
40
1.72
83764--83821
20
2.9
20
94
0
98
39
10
27
22
1.86
83771--83827
20
2.9
19
89
5
71
42
10
26
21
1.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
83940--83988
18
2.8
17
78
6
53
40
2
2
55
1.23

Tables:   1

The End!