Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005342.1 Hibiscus syriacus cultivar Beakdansim tig00012102_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42217

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2329--2377
2
25.0
2
95
4
91
48
0
51
0
1.00
4147--4204
18
3.4
17
72
9
55
32
1
5
60
1.29
8619--8671
23
2.3
23
90
0
79
33
15
43
7
1.74
10089--10185
47
2.0
48
90
2
151
36
6
21
36
1.79
22575--22629
30
2.0
27
82
13
67
41
30
7
20
1.79
24860--24923
2
32.0
2
100
0
128
50
0
0
50
1.00
26042--26102
2
31.5
2
90
6
99
50
0
1
47
1.10
30956--31001
19
2.3
20
85
7
58
50
0
2
47
1.13
34196--34277
39
2.1
39
100
0
164
42
7
17
32
1.76
34790--34840
2
26.0
2
92
4
86
49
1
0
49
1.12
35110--35136
2
13.5
2
100
0
54
48
0
0
51
1.00
35262--35308
20
2.3
20
88
0
76
36
21
17
25
1.94
35302--35367
20
3.3
20
79
10
73
42
25
10
21
1.85
35302--35386
19
4.4
19
79
10
73
41
24
10
23
1.86
35316--35387
19
3.7
19
85
3
90
40
23
8
27
1.83
38567--38603
18
2.1
18
89
0
56
56
21
2
18
1.54
38897--38934
20
1.9
20
94
0
67
18
21
23
36
1.95
40201--40249
21
2.3
22
92
3
82
22
14
40
22
1.90
40332--40378
19
2.5
19
100
0
94
21
10
12
55
1.67
40384--40425
19
2.2
19
86
0
57
38
19
21
21
1.94
40419--40568
20
7.6
20
89
1
221
19
12
22
46
1.83

Tables:   1

The End!