Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005345.1 Hibiscus syriacus cultivar Beakdansim tig00012107_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  79369

Tables:   1   

This is table  1  of  1  ( 44 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
526--551
7
3.7
7
100
0
52
69
0
0
30
0.89
4829--4903
39
1.9
39
100
0
150
25
21
22
30
1.99
5465--5522
30
1.9
31
82
10
75
70
5
17
6
1.28
6539--6652
30
3.9
29
77
4
102
19
14
7
58
1.59
6545--6679
30
4.6
29
76
5
101
19
13
7
60
1.57
6551--6681
58
2.2
59
82
2
165
19
12
6
61
1.54
11704--11741
19
2.0
19
94
0
67
36
15
13
34
1.87
19725--19788
32
2.0
32
90
0
101
18
14
10
56
1.67
21613--21669
12
5.0
12
79
14
59
77
7
14
1
1.06
21576--21674
28
3.7
28
74
14
93
74
6
17
2
1.11
21602--21672
19
4.1
17
70
21
58
77
7
14
1
1.04
22860--23027
68
2.6
66
85
5
218
29
11
16
42
1.83
22888--23085
68
3.0
69
81
6
196
27
14
14
43
1.84
23134--23587
134
3.4
135
82
4
469
27
31
16
25
1.96
23804--23976
91
1.9
91
92
0
292
33
20
14
31
1.93
24173--24210
20
1.9
20
94
0
67
34
18
26
21
1.96
24280--24327
21
2.3
21
92
0
78
16
12
33
37
1.86
26194--26298
30
3.5
29
76
7
104
21
13
7
57
1.61
35761--35822
3
21.3
3
80
12
76
33
1
0
64
1.03
44549--44629
21
3.8
21
77
9
74
22
35
24
17
1.95
44547--44608
23
2.9
21
88
7
81
20
33
25
19
1.96
44996--45047
26
2.0
25
88
3
77
59
3
3
32
1.33
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48695--48719
13
1.9
13
100
0
50
8
8
8
76
1.18
55987--57663
4
423.0
4
97
2
3183
24
0
25
49
1.50
57719--57801
26
3.2
26
66
24
66
56
7
7
28
1.53
59952--60282
163
2.0
168
97
2
627
26
11
12
49
1.75
60517--60579
15
4.3
15
71
17
51
60
4
0
34
1.18
64540--64819
138
2.1
131
87
7
395
26
13
14
46
1.81
67877--67985
23
4.8
23
72
8
80
33
25
22
18
1.97
68061--68113
15
3.5
15
76
16
56
39
20
5
33
1.76
68057--68125
14
4.7
15
75
16
56
39
18
5
36
1.75
69657--69694
15
2.5
15
95
0
67
28
13
23
34
1.92
72233--72285
16
3.3
16
78
0
61
73
1
3
20
1.08
72225--72282
5
11.2
5
74
7
53
72
1
3
22
1.09
72237--72289
27
2.0
27
85
7
72
69
1
3
24
1.15
72474--72523
20
2.4
22
86
13
86
58
0
14
28
1.37
72480--72523
20
2.2
20
100
0
88
59
0
13
27
1.35
72608--72638
2
15.5
2
100
0
62
51
0
0
48
1.00
73475--73510
18
2.0
18
88
0
54
30
8
36
25
1.85
74239--74347
3
36.3
3
92
0
92
55
0
10
33
1.40
74764--74815
24
2.2
24
82
6
61
51
0
1
46
1.12
74866--74892
13
2.1
13
100
0
54
55
0
0
44
0.99
74876--74918
22
2.0
22
95
0
77
48
0
0
51
1.00
75213--75246
16
2.1
17
88
5
52
64
0
0
35
0.94

Tables:   1

The End!