Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005347.1 Hibiscus syriacus cultivar Beakdansim tig00012124_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38381

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
774--827
28
1.9
28
81
7
65
57
7
5
29
1.49
914--938
13
1.9
13
100
0
50
8
16
4
72
1.24
4709--4742
15
2.3
15
95
5
61
44
8
5
41
1.60
8164--8197
13
2.6
13
90
0
50
5
23
17
52
1.66
15868--15905
6
6.3
6
82
11
51
78
0
2
18
0.86
16731--16796
23
2.9
23
81
0
87
45
15
1
37
1.55
18555--18613
19
3.2
19
73
2
57
32
5
10
52
1.57
18516--18582
23
2.8
23
84
8
82
31
2
17
47
1.63
18518--18565
4
11.8
4
84
10
62
29
2
20
47
1.61
18768--18822
28
2.0
28
88
0
83
49
16
1
32
1.56
25496--25852
181
2.0
173
90
4
561
29
16
23
30
1.96
35485--35563
2
40.5
2
92
5
135
49
1
0
49
1.09

Tables:   1

The End!