Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005351.1 Hibiscus syriacus cultivar Beakdansim tig00012148_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  100932

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
408--436
14
2.0
15
93
6
51
58
27
0
13
1.36
3763--3844
29
2.8
29
85
9
114
32
13
10
42
1.79
16180--16218
16
2.5
16
87
4
53
30
17
10
41
1.83
30670--30801
59
2.2
59
83
10
155
34
17
16
31
1.92
30670--30809
60
2.4
60
80
11
155
33
17
17
31
1.93
31232--31292
2
30.5
2
100
0
122
49
0
0
50
1.00
33102--33134
16
2.1
16
94
0
57
69
9
0
21
1.15
35363--35421
31
1.9
31
92
0
100
44
6
6
42
1.57
35447--35488
22
1.9
22
95
0
75
54
11
0
33
1.37
35449--35501
22
2.4
22
84
6
63
58
11
0
30
1.33
37018--37051
16
2.1
16
94
0
59
70
0
0
29
0.87
37864--37917
26
2.1
26
100
0
108
42
24
11
22
1.85
39143--39179
19
1.9
19
94
0
65
8
24
45
21
1.78
41654--41683
2
15.0
2
100
0
60
0
50
0
50
1.00
42162--42221
26
2.3
26
91
0
93
21
15
13
50
1.78
48800--48853
4
14.8
4
90
3
55
68
0
0
31
0.90
48790--48843
24
2.2
25
80
9
67
64
0
1
33
1.04
48942--48994
2
27.0
2
88
3
81
49
0
3
47
1.19
49474--49520
2
23.5
2
100
0
94
51
0
0
48
1.00
56005--56036
2
16.0
2
100
0
64
50
0
0
50
1.00
61568--61600
4
8.2
4
93
0
57
51
21
0
27
1.48
65049--65110
16
3.9
16
76
0
70
48
24
11
16
1.78
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65048--65110
32
2.0
32
83
0
81
47
25
11
15
1.79
65019--65139
48
2.5
47
82
7
129
51
22
11
14
1.75
72730--72762
17
1.9
17
93
0
57
57
0
6
36
1.23
73260--73284
2
12.5
2
100
0
50
48
0
0
52
1.00
82747--82783
15
2.5
15
95
0
65
24
27
5
43
1.76
87771--87830
26
2.3
26
88
2
84
33
8
25
33
1.86
92529--92585
20
2.8
21
84
5
64
42
3
5
49
1.42
92530--92585
21
2.7
20
81
10
67
41
3
5
50
1.43
93584--93637
19
2.7
19
72
16
56
61
1
0
37
1.07
98294--98339
21
2.1
21
84
4
56
54
2
10
32
1.47

Tables:   1

The End!