Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005354.1 Hibiscus syriacus cultivar Beakdansim tig00012158_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70080

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14673--14833
78
2.1
77
96
3
297
20
12
7
59
1.57
14891--14929
19
2.0
21
90
10
64
28
5
0
66
1.12
14886--14929
22
2.0
21
86
4
61
29
6
0
63
1.20
25680--25708
1
29.0
1
100
0
58
100
0
0
0
0.00
26607--26712
56
1.9
56
98
0
203
33
26
17
21
1.96
26494--26817
161
2.0
161
100
0
648
32
25
18
23
1.97
26665--27231
106
5.4
106
94
1
915
32
25
20
22
1.98
29059--29213
78
2.0
76
96
2
283
20
12
7
59
1.57
36877--36959
43
1.9
43
92
0
139
50
24
4
20
1.67
44136--44175
2
20.0
2
100
0
80
50
0
0
50
1.00
48764--48802
13
3.0
13
88
0
51
33
5
12
48
1.63
50923--50970
20
2.4
20
82
6
62
39
25
22
12
1.89
50998--51046
20
2.5
20
82
0
62
46
16
20
16
1.83
50920--51083
77
2.1
77
90
0
256
41
18
18
20
1.91
51322--51368
20
2.3
20
88
0
67
14
21
17
46
1.83
51284--51445
77
2.1
76
86
5
220
21
16
20
40
1.91
57289--58650
453
3.0
452
92
1
2260
40
17
15
27
1.89
60065--60157
27
3.5
27
82
2
125
33
4
12
49
1.61
61762--62211
224
2.0
225
97
2
861
27
10
16
45
1.79
63425--63478
20
2.7
20
100
0
108
25
27
11
35
1.90
64850--64885
18
2.0
18
100
0
72
16
16
16
50
1.79

Tables:   1

The End!