Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005357.1 Hibiscus syriacus cultivar Beakdansim tig00012169_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73969

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
133--187
20
2.7
20
75
13
58
45
0
5
49
1.25
10856--10913
27
2.0
28
83
9
73
34
1
8
55
1.41
11510--11540
2
15.5
2
100
0
62
51
0
0
48
1.00
11724--11768
20
2.5
18
80
19
58
24
24
11
40
1.87
11737--11774
20
1.9
20
100
0
76
23
28
10
36
1.88
11956--12014
29
2.0
29
90
0
91
44
5
6
44
1.52
19375--19399
12
2.1
12
100
0
50
40
24
16
20
1.91
31370--31427
3
19.0
3
82
10
73
37
0
0
62
0.96
32676--32755
29
2.7
31
83
12
107
37
8
5
48
1.56
32871--32897
3
9.0
3
100
0
54
33
0
0
66
0.92
32902--32933
2
16.0
2
93
0
55
53
0
0
46
1.00
33694--33853
60
2.7
60
85
1
205
42
6
21
29
1.77
36557--36586
12
2.4
13
88
11
53
60
0
0
40
0.97
37133--37186
22
2.5
22
90
0
90
3
48
31
16
1.64
37401--37434
15
2.2
16
89
5
52
2
0
32
64
1.08
38018--38068
27
1.9
27
84
11
70
52
5
1
39
1.37
38030--38215
36
5.1
36
76
11
157
44
6
4
44
1.49
38165--38268
25
3.8
26
71
12
84
46
5
3
44
1.45
38093--38344
127
2.0
127
98
1
488
44
6
4
44
1.50
38219--38419
37
5.4
37
80
8
205
44
6
3
44
1.49
38316--38442
37
3.5
34
77
11
101
47
7
3
41
1.48
39037--39813
84
9.4
80
80
6
854
23
21
25
29
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39034--39794
164
4.6
165
88
2
1073
23
20
25
29
1.99
44838--44867
12
2.4
13
88
11
53
60
0
0
40
0.97
44965--45024
24
2.5
24
81
13
61
73
5
5
16
1.19
45418--45471
22
2.5
22
90
0
90
3
48
31
16
1.64
46306--46354
27
1.9
25
84
12
64
53
6
2
38
1.38
46453--46555
27
3.9
25
73
16
84
44
5
3
45
1.46
46316--46706
36
10.1
37
73
17
221
44
6
4
44
1.49
46489--46518
15
1.9
16
93
6
53
53
6
0
40
1.27
46505--46706
37
5.4
37
79
9
207
44
6
3
44
1.49
46381--46631
126
2.0
124
97
2
475
43
6
4
45
1.50
46566--46728
74
2.2
71
82
7
184
47
7
3
41
1.49
46603--46729
37
3.5
34
77
11
101
47
7
3
41
1.48
50030--50081
21
2.4
22
81
12
63
67
3
3
25
1.25
50044--50086
14
3.1
14
83
6
52
69
2
4
23
1.18

Tables:   1

The End!