Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005367.1 Hibiscus syriacus cultivar Beakdansim tig00012200_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65217

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
739--1667
53
18.0
51
81
9
933
21
24
19
34
1.96
729--1678
104
9.1
105
84
6
1116
21
24
19
35
1.96
2045--2239
36
5.4
36
83
1
176
23
18
22
35
1.95
2101--2237
71
1.9
71
83
0
175
19
20
21
37
1.94
3544--3798
125
2.0
124
87
0
357
25
27
15
31
1.96
11856--11899
10
4.1
10
81
16
52
11
9
18
61
1.55
11856--11936
23
3.5
23
79
5
92
11
9
18
60
1.57
20417--20528
3
37.7
3
89
5
147
34
3
0
60
1.20
21188--21254
2
33.5
2
100
0
134
50
0
0
49
1.00
21416--21524
24
4.5
24
77
6
114
48
16
16
18
1.81
21418--21487
12
5.8
12
73
6
61
51
18
14
15
1.77
21416--21524
48
2.3
48
82
6
132
48
16
16
18
1.81
22651--22686
18
2.0
18
88
0
54
30
16
0
52
1.44
24002--24035
15
2.3
15
94
0
59
26
26
32
14
1.95
26171--26551
30
12.7
30
82
6
400
18
11
8
61
1.53
26171--26542
59
6.2
60
81
7
407
18
11
8
62
1.52
28280--28357
32
2.4
32
100
0
156
14
12
7
65
1.46
28324--28577
126
2.0
126
97
0
481
27
13
14
43
1.83
30336--30384
12
4.1
12
86
7
73
69
8
22
0
1.14
30323--30390
19
3.5
19
74
18
68
73
7
19
0
1.06
31601--31691
37
2.5
37
76
8
105
31
19
14
34
1.92
31806--32015
62
3.3
64
84
6
239
24
15
15
44
1.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32244--32386
20
7.6
19
76
17
106
41
1
1
55
1.17
32256--32388
3
45.3
3
80
7
130
41
1
0
56
1.14
35306--35579
135
2.1
131
83
4
334
27
32
17
23
1.96
35777--35818
3
13.7
3
90
5
66
35
2
0
61
1.09
35777--35818
16
2.7
15
89
7
66
35
2
0
61
1.09
37264--37509
30
8.2
30
84
4
291
16
11
9
62
1.53
46953--46997
21
2.1
21
91
0
72
31
11
20
37
1.87
52631--52677
21
2.2
21
100
0
94
27
34
19
19
1.96
52698--53044
21
16.8
20
90
4
414
21
23
21
34
1.97
52698--53041
42
8.3
41
92
2
489
21
22
21
34
1.97
52728--53041
63
5.0
63
96
0
567
21
23
21
34
1.97
53644--53709
6
11.5
6
98
1
111
0
16
53
30
1.44
53997--54039
21
2.0
21
86
13
61
13
16
9
60
1.58
54432--54477
23
2.0
23
86
0
65
43
10
15
30
1.81
54388--54630
87
2.6
93
87
8
345
41
11
12
34
1.79
54515--54562
23
2.1
23
84
7
62
39
6
16
37
1.74
54785--55928
199
5.7
197
88
3
1496
30
15
14
39
1.87
59535--59566
2
16.0
2
100
0
64
50
0
0
50
1.00
60195--60941
201
3.8
200
79
11
829
30
14
15
39
1.87
60583--60929
181
1.9
180
85
4
484
30
15
14
38
1.88

Tables:   1

The End!