Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000537.1 Hibiscus syriacus cultivar Beakdansim tig00001039_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60237

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4980--5045
28
2.4
28
86
0
96
37
15
19
27
1.92
10073--10102
2
15.0
2
100
0
60
50
0
0
50
1.00
14159--14197
5
8.0
5
82
5
53
61
2
2
33
1.23
16728--16767
18
2.2
18
86
0
53
50
15
0
35
1.44
16671--16793
62
2.0
62
84
10
162
54
13
1
30
1.48
16742--16791
25
2.1
23
81
7
55
60
12
0
28
1.32
16771--16833
32
2.0
32
84
12
85
63
11
0
25
1.27
16715--16888
77
2.3
74
80
8
183
57
10
1
30
1.40
22627--22692
21
3.1
21
84
0
87
19
19
24
36
1.95
27401--27429
2
14.5
2
100
0
58
48
0
0
51
1.00
29504--29528
2
12.5
2
100
0
50
48
0
0
52
1.00
33990--34056
13
5.2
13
75
12
66
74
1
2
20
1.03
34098--34122
13
1.9
13
100
0
50
72
0
12
16
1.13
35978--36175
103
2.0
99
82
7
238
25
19
23
32
1.97
36236--36363
69
1.9
66
83
4
166
20
25
25
28
1.99
42243--42310
21
3.2
21
100
0
136
13
17
38
30
1.88
47386--47429
21
2.1
21
86
0
61
20
25
36
18
1.95
47462--47516
23
2.4
23
100
0
110
21
23
38
16
1.93
56947--56975
2
14.5
2
100
0
58
51
0
0
48
1.00
57018--57060
16
2.5
18
81
7
54
67
0
2
30
1.03

Tables:   1

The End!