Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005370.1 Hibiscus syriacus cultivar Beakdansim tig00012208_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42952

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1518--1570
2
26.5
2
88
0
79
43
0
0
56
0.99
12455--12487
13
2.5
13
100
0
66
84
6
9
0
0.76
12423--12497
24
3.1
23
78
14
80
81
2
16
0
0.80
16085--16182
49
2.0
49
97
0
187
45
10
5
38
1.60
16441--16928
54
8.9
54
77
4
415
42
19
12
25
1.87
17013--17056
19
2.3
19
92
0
70
31
6
22
38
1.81
17173--17338
48
3.3
50
84
9
187
25
15
10
48
1.76
18127--18151
3
8.3
3
100
0
50
0
32
0
68
0.90
25618--25863
121
2.0
123
96
3
462
41
10
12
35
1.77
28360--28401
3
14.3
3
90
5
68
33
2
0
64
1.07
29184--29234
25
2.0
25
100
0
102
49
7
11
31
1.68
29641--29827
46
4.1
46
88
0
293
25
30
9
34
1.88
30522--30552
2
15.5
2
100
0
62
48
0
0
51
1.00
38355--38381
2
13.5
2
100
0
54
48
0
0
51
1.00

Tables:   1

The End!