Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005374.1 Hibiscus syriacus cultivar Beakdansim tig00012251_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47379

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1357--1412
23
2.4
23
87
0
85
25
35
17
21
1.95
18298--18324
6
4.5
6
100
0
54
0
48
0
51
1.00
24388--24444
3
19.7
3
78
7
64
28
3
1
66
1.18
27943--28004
32
2.0
32
96
3
117
14
14
9
61
1.57
30945--30982
11
3.4
11
89
7
58
71
10
13
5
1.30
32157--32199
12
3.8
11
79
14
52
51
27
0
20
1.48
32169--32202
4
9.0
4
87
12
54
50
26
0
23
1.50
32654--32892
105
2.3
102
83
9
281
31
19
11
37
1.88
32838--32922
36
2.4
36
84
4
109
30
21
11
36
1.89
32860--32954
36
2.7
34
79
6
93
32
18
13
34
1.90
33212--33339
29
4.5
29
89
4
181
30
10
15
43
1.80
33211--33339
59
2.3
55
85
6
177
31
10
15
43
1.80
33436--33545
30
3.4
30
70
16
94
32
10
12
43
1.78
33402--33598
67
3.0
67
93
0
315
30
12
12
44
1.78
33462--33588
37
3.6
37
69
15
124
31
11
11
45
1.76
33700--33924
121
1.9
119
81
7
276
30
14
12
42
1.83
33822--33946
64
2.0
63
88
1
187
31
14
11
43
1.80
33928--34007
40
2.0
40
87
4
117
31
20
11
37
1.87
34103--34146
15
2.9
15
93
0
70
31
20
4
43
1.72
34868--35069
40
4.7
43
70
12
112
23
31
19
25
1.98
34836--35236
133
3.1
130
82
8
494
24
31
18
24
1.97
35089--35203
40
2.8
39
79
11
115
23
34
20
21
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35407--35464
3
20.0
3
78
7
66
29
3
1
65
1.19
42319--42370
19
2.7
19
80
11
70
46
5
3
44
1.45

Tables:   1

The End!