Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005375.1 Hibiscus syriacus cultivar Beakdansim tig00012252_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  101603

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2086--2133
2
24.5
2
91
4
80
47
0
2
50
1.12
2234--2302
19
3.5
19
71
11
59
50
0
0
49
1.00
2239--2342
38
2.9
37
79
15
94
48
0
0
51
1.00
2292--2346
18
2.8
19
78
13
58
49
0
0
50
1.00
2277--2330
27
2.0
27
85
7
74
50
0
0
50
1.00
2295--2347
19
2.7
20
79
8
63
50
0
0
49
1.00
15210--15247
2
19.0
2
100
0
76
50
0
0
50
1.00
19175--19271
49
2.0
49
97
2
187
32
12
12
42
1.80
19310--19345
3
12.3
3
88
5
56
0
36
0
63
0.94
30413--30452
2
20.0
2
100
0
80
50
0
0
50
1.00
30615--30659
23
2.0
21
84
16
56
46
0
0
53
1.00
30620--30662
19
2.3
19
88
8
61
46
0
0
53
1.00
43626--43681
2
28.0
2
92
0
94
46
0
3
50
1.19
50389--50422
17
2.0
17
94
0
59
55
5
26
11
1.58
71841--71888
22
2.1
23
84
3
62
66
22
6
4
1.32
80808--80837
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!