Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000539.1 Hibiscus syriacus cultivar Beakdansim tig00001041_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66671

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4354--4393
21
1.9
21
89
0
62
15
27
37
20
1.92
5878--5927
19
2.6
19
100
0
100
26
22
16
36
1.94
16448--16472
12
2.1
12
100
0
50
68
0
8
24
1.16
31968--32002
18
1.9
18
94
0
61
51
2
0
45
1.16
32788--32873
3
25.7
3
74
17
55
56
3
1
38
1.24
32778--32818
19
2.3
19
88
12
61
48
2
0
48
1.14
32806--32875
7
10.0
7
74
22
67
58
2
1
37
1.22
33333--33367
16
2.1
17
89
5
54
57
0
5
37
1.23
33543--33591
25
2.0
25
91
0
80
53
10
10
26
1.66
35040--35071
2
16.0
2
93
0
55
53
0
0
46
1.00
35080--35115
16
2.2
16
90
0
54
75
2
2
19
1.06
36337--36373
2
19.0
2
88
5
58
54
0
0
45
1.00
37138--37491
106
3.4
106
80
6
411
22
18
24
34
1.96
38048--38195
75
1.9
77
82
5
185
11
20
8
59
1.58
47914--47949
12
2.8
13
87
8
56
77
13
0
8
0.98
48365--48408
2
22.0
2
100
0
88
50
0
0
50
1.00
49518--49570
2
27.0
2
92
3
90
52
0
0
47
1.00
62930--62964
10
3.5
10
88
0
52
20
2
17
60
1.49

Tables:   1

The End!