Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005391.1 Hibiscus syriacus cultivar Beakdansim tig00012357_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61407

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4165--4225
21
2.7
22
80
7
61
60
1
9
27
1.38
4621--4688
18
3.8
18
96
0
127
29
2
16
51
1.59
7607--7665
24
2.5
24
100
0
118
38
16
8
35
1.80
11427--11451
13
1.9
13
100
0
50
64
4
8
24
1.38
14661--14705
20
2.1
22
84
12
58
55
6
4
33
1.46
15763--15815
20
2.7
20
97
2
99
41
15
18
24
1.89
16170--16206
15
2.5
15
95
0
65
29
16
0
54
1.43
16327--16355
12
2.4
12
100
0
58
27
6
10
55
1.59
21910--21951
21
2.0
21
86
4
59
11
16
0
71
1.14
22906--22932
2
13.5
2
100
0
54
51
0
0
48
1.00
23035--23088
24
2.2
25
77
9
67
44
12
18
24
1.85
24233--24266
18
1.9
18
88
5
52
29
20
0
50
1.49
28942--28975
18
1.9
18
88
5
52
29
20
0
50
1.49
30325--30370
21
2.1
22
84
11
60
54
21
0
23
1.45
39635--39682
13
3.7
13
97
0
87
47
8
14
29
1.73
40089--40171
21
3.9
21
77
12
78
24
13
24
38
1.91
40089--40177
44
2.0
44
86
0
124
24
13
24
37
1.92
44118--44189
26
2.8
25
76
12
74
48
8
0
43
1.33
44572--44715
38
3.7
39
81
3
146
18
35
15
30
1.92
44572--44715
39
3.7
38
79
7
146
18
35
15
30
1.92
44572--44715
77
1.8
79
85
2
202
18
35
15
30
1.92
44898--44983
12
7.2
12
67
22
56
73
0
19
6
1.06
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44907--44987
15
5.4
15
69
10
58
72
0
20
6
1.05
44903--44971
24
2.8
25
78
8
70
73
0
18
7
1.05
44897--44988
23
4.3
22
75
15
77
72
0
20
6
1.06
47382--47425
23
1.9
23
85
0
61
31
6
29
31
1.84
47380--47431
23
2.3
23
75
0
59
36
5
28
28
1.80
47463--47540
3
26.0
3
82
10
97
34
2
0
62
1.09
50252--50285
16
2.1
16
88
0
50
23
20
2
52
1.60
59165--59377
110
2.0
108
84
5
277
38
16
19
25
1.92
59230--59639
191
2.1
193
87
4
596
36
15
19
28
1.92
59940--60012
3
25.0
3
78
15
82
34
2
0
63
1.09

Tables:   1

The End!