Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005400.1 Hibiscus syriacus cultivar Beakdansim tig00012375_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54661

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1182--1238
27
2.1
27
100
0
114
45
7
7
40
1.58
3000--3051
21
2.4
22
87
9
72
51
0
0
48
1.00
3403--3490
25
3.6
25
78
4
81
47
0
2
50
1.13
3457--3512
23
2.3
23
84
6
67
48
0
1
50
1.11
7055--7091
19
1.9
19
94
0
65
27
8
24
40
1.83
8764--8809
22
2.1
22
95
0
83
23
32
23
19
1.97
9312--9375
21
3.0
21
86
4
92
28
23
25
23
2.00
15630--15674
22
2.0
22
91
0
72
26
33
20
20
1.97
16188--16251
21
3.0
21
84
4
92
26
23
25
25
2.00
17663--17705
22
2.0
22
90
9
70
27
9
18
44
1.80
17665--17713
22
2.2
22
82
10
64
28
8
16
46
1.75
17920--18009
3
28.7
3
84
8
108
37
1
0
61
1.04
20359--20429
30
2.6
26
77
14
72
32
4
1
61
1.23
20359--20425
28
2.5
27
83
7
75
32
4
1
61
1.25
20896--20920
9
2.8
9
100
0
50
28
0
0
72
0.86
25631--25678
11
4.7
11
85
15
68
81
0
18
0
0.70
25635--25700
8
7.4
8
78
14
51
78
0
19
1
0.82
25634--25685
19
2.7
19
88
11
88
80
0
19
0
0.71
25631--25694
27
2.3
28
91
5
103
79
0
18
1
0.81
25633--25685
10
5.5
10
82
17
76
81
0
18
0
0.70
25634--25685
9
5.6
9
84
15
70
80
0
19
0
0.71
28927--29098
74
2.3
75
80
1
184
31
15
21
30
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30378--30432
22
2.5
22
87
0
83
36
9
12
41
1.75
31097--31233
45
3.0
46
88
3
195
22
23
21
32
1.98
31241--31400
45
3.5
46
85
3
198
23
23
21
31
1.98
31097--31631
167
3.2
167
95
0
971
22
22
20
33
1.97
31408--31557
45
3.3
45
89
1
210
24
22
19
33
1.97
31740--31816
3
26.0
3
85
7
86
37
1
0
61
1.05
31773--31815
22
2.0
22
100
0
86
32
2
0
65
1.06
35304--35372
31
2.2
32
87
5
97
43
14
10
31
1.79
36504--36544
18
2.4
17
81
18
50
34
0
2
63
1.08
43598--43636
5
7.8
5
94
0
60
15
38
41
5
1.69
46910--46963
25
2.1
27
83
13
69
31
3
14
50
1.61

Tables:   1

The End!