Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005401.1 Hibiscus syriacus cultivar Beakdansim tig00012385_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  109280

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7765--7823
7
7.9
7
76
14
55
35
0
0
64
0.94
7765--7835
31
2.3
31
97
0
133
39
0
0
60
0.97
7763--7843
31
2.5
32
90
8
128
39
0
0
60
0.97
20637--20667
14
2.2
14
100
0
62
51
16
12
19
1.76
23673--23757
29
2.9
29
80
0
98
14
29
38
17
1.89
27156--27226
23
2.9
26
70
25
82
64
4
2
28
1.26
32087--32116
12
2.5
12
94
0
51
0
6
10
83
0.81
32087--32126
13
3.3
12
86
10
55
0
5
10
85
0.75
35196--35236
18
2.3
18
91
4
66
63
2
4
29
1.28
35504--35566
29
2.1
29
82
2
72
28
14
28
28
1.95
36327--36383
16
3.5
16
85
7
62
35
21
7
36
1.80
41730--41782
27
2.0
25
82
13
63
52
0
0
47
1.00
52009--52099
23
4.0
23
83
0
119
18
26
25
29
1.98
53407--53467
28
2.2
28
93
0
104
29
4
29
36
1.78
56952--57030
23
3.4
23
78
0
86
17
25
22
34
1.96
57990--58038
25
2.0
25
84
8
64
36
26
18
18
1.94
68497--68560
32
2.0
32
96
0
119
25
20
9
45
1.80
68572--68769
5
38.8
5
92
7
328
40
0
0
59
0.97
68755--68875
55
2.2
55
92
2
199
24
15
5
53
1.64
82427--82467
2
21.5
2
80
9
50
46
0
0
53
1.00
82835--82962
31
4.1
31
78
7
134
35
18
17
28
1.94
82836--82959
63
2.0
62
88
4
187
33
18
18
29
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
83647--83689
21
2.0
21
91
8
70
32
18
25
23
1.97
91886--91917
8
4.0
8
100
0
64
87
0
12
0
0.54
95688--95737
12
4.0
13
78
17
52
42
0
8
50
1.32
95846--95891
14
3.1
15
79
17
51
54
0
2
43
1.12
95932--95971
10
4.3
10
75
18
50
47
0
2
50
1.14
100705--100732
2
14.0
2
100
0
56
50
0
0
50
1.00
107294--107346
22
2.5
22
96
3
99
35
35
7
20
1.81
108937--109066
59
2.2
58
81
10
142
43
5
2
48
1.38

Tables:   1

The End!