Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005402.1 Hibiscus syriacus cultivar Beakdansim tig00012387_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66088

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2312--2343
16
2.0
16
100
0
64
37
0
0
62
0.95
2451--2510
31
1.9
31
100
0
120
43
6
6
43
1.57
24722--24756
18
1.9
18
94
0
61
22
0
14
62
1.31
24952--24989
18
2.2
18
90
4
60
71
2
0
26
1.00
39616--39651
6
6.0
6
90
0
54
19
19
61
0
1.35
44579--44612
11
3.1
11
87
12
52
38
0
0
61
0.96
44961--45048
43
2.0
43
100
0
176
26
18
22
32
1.97
46521--46572
26
2.0
26
100
0
104
19
34
15
30
1.93
49185--49227
22
2.0
22
86
9
61
55
18
0
25
1.42
51375--51430
29
1.9
29
100
0
112
32
10
10
46
1.73
51374--51436
29
2.2
29
91
0
108
33
9
9
47
1.68
52334--52788
150
3.0
150
82
1
581
25
28
14
30
1.95

Tables:   1

The End!