Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005403.1 Hibiscus syriacus cultivar Beakdansim tig00012388_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63743

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9534--9593
30
2.0
30
87
12
88
51
6
0
41
1.28
9597--9654
18
3.3
18
75
20
59
51
5
0
43
1.24
15512--15609
51
1.9
51
100
0
196
36
9
15
38
1.79
15601--15632
14
2.3
14
100
0
64
28
15
12
43
1.83
16687--16740
27
2.0
27
85
3
74
29
20
24
25
1.99
17581--17618
20
1.9
20
88
0
58
31
10
2
55
1.48
17580--17624
20
2.2
20
80
0
54
28
11
2
57
1.45
25660--25750
45
2.1
42
80
12
94
48
17
5
28
1.69
25967--26050
23
3.7
23
85
0
114
30
23
25
20
1.98
28158--28193
18
2.0
18
94
0
63
19
19
33
27
1.96
28124--28238
46
2.4
46
89
4
167
19
17
28
34
1.94
28398--28424
7
3.9
7
100
0
54
29
0
25
44
1.54
30939--30972
10
3.3
10
84
8
50
44
8
8
38
1.67
38126--38213
45
2.0
42
80
12
97
48
17
4
29
1.66
38433--38536
23
4.5
23
90
0
154
28
22
28
20
1.98
44227--44304
26
3.0
26
84
1
93
25
17
25
30
1.97
45153--45197
21
2.1
21
84
8
56
26
13
2
57
1.48
54123--54153
15
2.0
16
93
6
55
61
0
0
38
0.96
54691--54735
20
2.3
20
84
3
65
46
2
2
48
1.26

Tables:   1

The End!