Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005404.1 Hibiscus syriacus cultivar Beakdansim tig00012392_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56966

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3403--3439
15
2.5
15
95
0
65
54
0
16
29
1.43
3786--3837
20
2.7
20
94
5
90
25
19
15
40
1.90
4889--4933
20
2.1
22
84
12
58
33
4
6
55
1.46
8133--8157
13
1.9
13
100
0
50
24
8
4
64
1.38
11904--11960
22
2.5
23
94
5
98
35
8
17
38
1.81
14877--14944
18
3.8
18
96
0
127
51
16
2
29
1.59
15354--15400
21
2.2
22
84
3
60
25
8
2
63
1.34
15353--15402
22
2.3
23
79
10
59
26
8
2
64
1.32
17743--17779
3
12.0
3
94
5
65
0
35
0
64
0.94
22568--22610
19
2.3
19
100
0
86
37
13
0
48
1.43
27006--27046
21
1.9
22
85
5
57
34
2
12
51
1.52
31034--31067
15
2.3
15
95
5
61
79
0
14
5
0.91
31027--31067
15
2.7
16
85
11
59
80
2
12
4
0.97
31027--31077
15
3.5
15
81
2
50
80
1
13
3
0.94
38067--38181
54
2.1
54
86
0
158
25
20
20
33
1.97
43628--43669
18
2.2
20
91
8
70
38
7
9
45
1.64
43628--43670
19
2.2
20
84
12
63
39
6
9
44
1.64
51550--51593
18
2.5
17
78
7
52
22
4
2
70
1.17
51894--51942
23
2.2
22
82
10
55
24
12
10
53
1.69

Tables:   1

The End!