Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: VEPZ01005406.1 Hibiscus syriacus cultivar Beakdansim tig00012396_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 57263
ACGTcount: A:0.32, C:0.18, G:0.18, T:0.32
Found at i:2619 original size:19 final size:20
Alignment explanation
Indices: 2595--2633 Score: 53
Period size: 21 Copynumber: 1.9 Consensus size: 20
2585 TGATGTTTTA
2595 ATGAAT-ATAAAATATGATT
1 ATGAATAATAAAATATGATT
*
2614 ATGAATGAATAAAATGTGAT
1 ATGAAT-AATAAAATATGAT
2634 GCAAAAATTT
Statistics
Matches: 17, Mismatches: 1, Indels: 2
0.85 0.05 0.10
Matches are distributed among these distances:
19 6 0.35
21 11 0.65
ACGTcount: A:0.51, C:0.00, G:0.15, T:0.33
Consensus pattern (20 bp):
ATGAATAATAAAATATGATT
Found at i:16810 original size:17 final size:17
Alignment explanation
Indices: 16788--16821 Score: 68
Period size: 17 Copynumber: 2.0 Consensus size: 17
16778 ATTTGCATTA
16788 TCTTCAACCTCTTTCTG
1 TCTTCAACCTCTTTCTG
16805 TCTTCAACCTCTTTCTG
1 TCTTCAACCTCTTTCTG
16822 AACCTTTCAT
Statistics
Matches: 17, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
17 17 1.00
ACGTcount: A:0.12, C:0.35, G:0.06, T:0.47
Consensus pattern (17 bp):
TCTTCAACCTCTTTCTG
Found at i:20852 original size:6 final size:6
Alignment explanation
Indices: 20841--20901 Score: 52
Period size: 6 Copynumber: 9.3 Consensus size: 6
20831 ATCAAAGATG
*
20841 AAAATA AAAAT- AAAATA AAAATA GAATGATATA AAAAAA AAAATA ATAAGATA
1 AAAATA AAAATA AAAATA AAAATA -AA--A-ATA AAAATA AAAATA A-AA-ATA
20894 AAAATA AA
1 AAAATA AA
20902 CAAAAAAGAA
Statistics
Matches: 46, Mismatches: 2, Indels: 14
0.74 0.03 0.23
Matches are distributed among these distances:
5 5 0.11
6 24 0.52
7 7 0.15
8 4 0.09
9 3 0.07
10 3 0.07
ACGTcount: A:0.77, C:0.00, G:0.05, T:0.18
Consensus pattern (6 bp):
AAAATA
Found at i:20913 original size:22 final size:21
Alignment explanation
Indices: 20844--20913 Score: 61
Period size: 22 Copynumber: 3.0 Consensus size: 21
20834 AAAGATGAAA
20844 ATAAAAATAAAATAAAAATAGAATG
1 ATAAAAAT-AAA-AAAAA-AGAA-G
*
20869 ATATAAAA-AAAAAAATAATAAG
1 ATA-AAAATAAAAAAA-AAGAAG
20891 ATAAAAATAAACAAAAAAGAAG
1 ATAAAAATAAA-AAAAAAGAAG
20913 A
1 A
20914 CTATCGAATA
Statistics
Matches: 39, Mismatches: 2, Indels: 11
0.75 0.04 0.21
Matches are distributed among these distances:
21 4 0.10
22 13 0.33
23 11 0.28
24 4 0.10
25 3 0.08
26 4 0.10
ACGTcount: A:0.76, C:0.01, G:0.07, T:0.16
Consensus pattern (21 bp):
ATAAAAATAAAAAAAAAGAAG
Found at i:23124 original size:122 final size:121
Alignment explanation
Indices: 22741--23137 Score: 454
Period size: 122 Copynumber: 3.3 Consensus size: 121
22731 GAGGACTTCG
* * ** * ** * ** * *
22741 GGTCAATTTGGATATAATTTGGTGTTGAAGATGACAATACTCGTCCACGTTGAAGAGATCTGGCC
1 GGTCAATCTGGAGATAATACGGTGTTGAAGAAGACTCTACTCATCCGTGTTGAAGAGTTCTAGCC
* ** * *
22806 GCTTTCAGATAAATTGTTTGTTGAAGATGACGTTGTTACTTCTCATTGAGAAAAT-A
66 GCTTTCAGGTAAATTGTTTACTGAAGATGACGTTGTT-CTTCTCGTTGAGGAAATCA
* * * *
22862 GGGTCAATTTGGAGATAAAACGATGTTGAAGACGACTCTACTCATCCGTGTTGAAGAGTTCTAGC
1 -GGTCAATCTGGAGATAATACGGTGTTGAAGAAGACTCTACTCATCCGTGTTGAAGAGTTCTAGC
*
22927 CGCTTTCAGGTAAATTATTTACTGAAGATGACGTTGTTCCTTCTCGTTGAGGAAATCA
65 CGCTTTCAGGTAAATTGTTTACTGAAGATGACGTTGTT-CTTCTCGTTGAGGAAATCA
* * *
22985 GGTTAATCTGGAGATAATACGGTGTTGAATAAGACTCTGCTCATCCGTGTTGAAGAGTTCTAGCC
1 GGTCAATCTGGAGATAATACGGTGTTGAAGAAGACTCTACTCATCCGTGTTGAAGAGTTCTAGCC
* * * * *
23050 ACTTTCAGGTAAATTGTTAACTGAAGATGACGTTGTTCTTTCTTGTTAAGGAAGTCA
66 GCTTTCAGGTAAATTGTTTACTGAAGATGACGTTGTTC-TTCTCGTTGAGGAAATCA
* **
23107 GGTCAATCTAGAGATAATTTGGTGTTGAAGA
1 GGTCAATCTGGAGATAATACGGTGTTGAAGA
23138 TGTTCTAGAA
Statistics
Matches: 235, Mismatches: 38, Indels: 4
0.85 0.14 0.01
Matches are distributed among these distances:
121 1 0.00
122 233 0.99
123 1 0.00
ACGTcount: A:0.28, C:0.14, G:0.24, T:0.34
Consensus pattern (121 bp):
GGTCAATCTGGAGATAATACGGTGTTGAAGAAGACTCTACTCATCCGTGTTGAAGAGTTCTAGCC
GCTTTCAGGTAAATTGTTTACTGAAGATGACGTTGTTCTTCTCGTTGAGGAAATCA
Found at i:23314 original size:83 final size:83
Alignment explanation
Indices: 23175--23363 Score: 236
Period size: 83 Copynumber: 2.3 Consensus size: 83
23165 AGACAATATG
* * * * * *
23175 GTTCCTTTGTGTTGAGGAAATATGATTGTCTAAGGATGACACTGCTCCTTCGCGTTG-AGAAGAT
1 GTTCCTTCGTATTGAGGAAGTCTGATTGTCTAAGGATGACACTGCTCCTTCACGTTGAAG-AGAC
*
23239 ATGGTCGGTGGGCGACATT
65 ATGGTCGGTGGACGACATT
* * * *
23258 GTTCCTTCTTATTGAGGAAGTCTGGTTGTCTGAGGATGACACTGCTCCTTCACGTTGAAGAGACC
1 GTTCCTTCGTATTGAGGAAGTCTGATTGTCTAAGGATGACACTGCTCCTTCACGTTGAAGAGACA
*
23323 TGGTCGGTGGATGACATT
66 TGGTCGGTGGACGACATT
* *
23341 TTTCCTTCGTGTTGAGGAAGTCT
1 GTTCCTTCGTATTGAGGAAGTCT
23364 AGCAGTTCTA
Statistics
Matches: 90, Mismatches: 15, Indels: 2
0.84 0.14 0.02
Matches are distributed among these distances:
83 88 0.98
84 2 0.02
ACGTcount: A:0.20, C:0.17, G:0.29, T:0.34
Consensus pattern (83 bp):
GTTCCTTCGTATTGAGGAAGTCTGATTGTCTAAGGATGACACTGCTCCTTCACGTTGAAGAGACA
TGGTCGGTGGACGACATT
Found at i:28405 original size:13 final size:13
Alignment explanation
Indices: 28353--28405 Score: 61
Period size: 13 Copynumber: 3.8 Consensus size: 13
28343 GCTTCTTGTC
*
28353 TTCTTTTTTTCTTT
1 TTCTTTTTTTC-AT
*
28367 TTCTTTTTTGTTTAT
1 TTC-TTTTT-TTCAT
28382 TTCTTTTTTTCAT
1 TTCTTTTTTTCAT
28395 TTCTTTTTTTC
1 TTCTTTTTTTC
28406 TCTTTGATTT
Statistics
Matches: 34, Mismatches: 3, Indels: 5
0.81 0.07 0.12
Matches are distributed among these distances:
13 15 0.44
14 8 0.24
15 9 0.26
16 2 0.06
ACGTcount: A:0.04, C:0.13, G:0.02, T:0.81
Consensus pattern (13 bp):
TTCTTTTTTTCAT
Found at i:32950 original size:5 final size:5
Alignment explanation
Indices: 32933--33001 Score: 54
Period size: 5 Copynumber: 13.8 Consensus size: 5
32923 ATCAAAGATG
* * *
32933 AAAAT ACAAAT AAAAT AAATAT AGAAT GAGAT AAAAT AAAAT AAAAT --AAT
1 AAAAT A-AAAT AAAAT AAA-AT AAAAT AAAAT AAAAT AAAAT AAAAT AAAAT
*
32983 AAGAT AAAAAT AAAA- AAAA
1 AAAAT -AAAAT AAAAT AAAA
33002 CAATAAGACT
Statistics
Matches: 51, Mismatches: 8, Indels: 11
0.73 0.11 0.16
Matches are distributed among these distances:
3 3 0.06
4 4 0.08
5 31 0.61
6 13 0.25
ACGTcount: A:0.74, C:0.01, G:0.06, T:0.19
Consensus pattern (5 bp):
AAAAT
Found at i:32991 original size:23 final size:24
Alignment explanation
Indices: 32940--33009 Score: 81
Period size: 23 Copynumber: 2.9 Consensus size: 24
32930 ATGAAAATAC
*
32940 AAATAAAATAAATATAGAATGAGAT-A
1 AAATAAAATAAA-AT--AATAAGATAA
32966 AAATAAAATAAAATAATAAGATAA
1 AAATAAAATAAAATAATAAGATAA
*
32990 AAATAAAA-AAAACAATAAGA
1 AAATAAAATAAAATAATAAGA
33010 CTATCGAATA
Statistics
Matches: 41, Mismatches: 2, Indels: 5
0.85 0.04 0.10
Matches are distributed among these distances:
23 18 0.44
24 9 0.22
25 2 0.05
26 12 0.29
ACGTcount: A:0.73, C:0.01, G:0.07, T:0.19
Consensus pattern (24 bp):
AAATAAAATAAAATAATAAGATAA
Found at i:33501 original size:12 final size:12
Alignment explanation
Indices: 33484--33510 Score: 54
Period size: 12 Copynumber: 2.2 Consensus size: 12
33474 ATTAAATGCT
33484 GGAAATTAAAAG
1 GGAAATTAAAAG
33496 GGAAATTAAAAG
1 GGAAATTAAAAG
33508 GGA
1 GGA
33511 TGAAATAAAA
Statistics
Matches: 15, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
12 15 1.00
ACGTcount: A:0.56, C:0.00, G:0.30, T:0.15
Consensus pattern (12 bp):
GGAAATTAAAAG
Found at i:33908 original size:32 final size:34
Alignment explanation
Indices: 33741--33913 Score: 131
Period size: 34 Copynumber: 5.0 Consensus size: 34
33731 ATTAGTTTAT
* *
33741 ACAAT-AAAATAAAATGTTAGTAA-GTTAGTAAGA
1 ACAATAAAAATAAAAAGTAAG-AATGTTAGTAAGA
* * * *
33774 ACAATAAAAATAAAAAGGTCAGTATGTTGGTATGA
1 ACAATAAAAATAAAAA-GTAAGAATGTTAGTAAGA
* * *
33809 ATAATAAAATAAAAGTTAGAATGTTAGTAA-GTTAGTAAGA
1 ACAATAAAA-ATAA---A-AA-GTAAG-AATGTTAGTAAGA
* *
33849 ACAATAAAAATAAAAAGTTAGAATGTTAGTATGA
1 ACAATAAAAATAAAAAGTAAGAATGTTAGTAAGA
33883 ACAAT-AAAAT-AAAAGTAAGAATGTTAGTAAG
1 ACAATAAAAATAAAAAGTAAGAATGTTAGTAAG
33914 TTAGAAAAGT
Statistics
Matches: 113, Mismatches: 17, Indels: 21
0.75 0.11 0.14
Matches are distributed among these distances:
32 19 0.17
33 12 0.11
34 29 0.26
35 22 0.19
36 4 0.04
39 4 0.04
40 22 0.19
41 1 0.01
ACGTcount: A:0.54, C:0.03, G:0.17, T:0.27
Consensus pattern (34 bp):
ACAATAAAAATAAAAAGTAAGAATGTTAGTAAGA
Found at i:33911 original size:74 final size:75
Alignment explanation
Indices: 33743--33917 Score: 284
Period size: 74 Copynumber: 2.4 Consensus size: 75
33733 TAGTTTATAC
* *
33743 AATAAAA-TAA-AATGTTAGTAAGTTAGTAAGAACAATAAAAATAAAAAGGTCAGTATGTTGGTA
1 AATAAAAGTAAGAATGTTAGTAAGTTAGTAAGAACAATAAAAATAAAAAGGTCAGAATGTTAGTA
*
33806 TGAATAATAA
66 TGAACAATAA
* *
33816 AATAAAAGTTAGAATGTTAGTAAGTTAGTAAGAACAATAAAAATAAAAA-GTTAGAATGTTAGTA
1 AATAAAAGTAAGAATGTTAGTAAGTTAGTAAGAACAATAAAAATAAAAAGGTCAGAATGTTAGTA
33880 TGAACAATAA
66 TGAACAATAA
33890 AATAAAAGTAAGAATGTTAGTAAGTTAG
1 AATAAAAGTAAGAATGTTAGTAAGTTAG
33918 AAAAGTTAGC
Statistics
Matches: 94, Mismatches: 6, Indels: 3
0.91 0.06 0.03
Matches are distributed among these distances:
73 7 0.07
74 50 0.53
75 37 0.39
ACGTcount: A:0.53, C:0.02, G:0.17, T:0.27
Consensus pattern (75 bp):
AATAAAAGTAAGAATGTTAGTAAGTTAGTAAGAACAATAAAAATAAAAAGGTCAGAATGTTAGTA
TGAACAATAA
Found at i:35098 original size:13 final size:13
Alignment explanation
Indices: 35080--35105 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
35070 GGGGGGGGGG
35080 CTGTTTTTGCTTT
1 CTGTTTTTGCTTT
35093 CTGTTTTTGCTTT
1 CTGTTTTTGCTTT
35106 TACAGCTCCT
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.00, C:0.15, G:0.15, T:0.69
Consensus pattern (13 bp):
CTGTTTTTGCTTT
Found at i:36262 original size:14 final size:14
Alignment explanation
Indices: 36245--36276 Score: 64
Period size: 14 Copynumber: 2.3 Consensus size: 14
36235 ATTATACAGA
36245 GATTTATTAGCAGG
1 GATTTATTAGCAGG
36259 GATTTATTAGCAGG
1 GATTTATTAGCAGG
36273 GATT
1 GATT
36277 ACTTCCCATT
Statistics
Matches: 18, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
14 18 1.00
ACGTcount: A:0.28, C:0.06, G:0.28, T:0.38
Consensus pattern (14 bp):
GATTTATTAGCAGG
Found at i:36339 original size:4 final size:4
Alignment explanation
Indices: 36330--36362 Score: 66
Period size: 4 Copynumber: 8.2 Consensus size: 4
36320 TGTTCAAATG
36330 TTTA TTTA TTTA TTTA TTTA TTTA TTTA TTTA T
1 TTTA TTTA TTTA TTTA TTTA TTTA TTTA TTTA T
36363 ACATACATTG
Statistics
Matches: 29, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
4 29 1.00
ACGTcount: A:0.24, C:0.00, G:0.00, T:0.76
Consensus pattern (4 bp):
TTTA
Found at i:44251 original size:16 final size:16
Alignment explanation
Indices: 44226--44256 Score: 53
Period size: 16 Copynumber: 1.9 Consensus size: 16
44216 CAACACATAA
*
44226 GTGTTTATATTATTAT
1 GTGTTAATATTATTAT
44242 GTGTTAATATTATTA
1 GTGTTAATATTATTA
44257 ATAATTTATC
Statistics
Matches: 14, Mismatches: 1, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
16 14 1.00
ACGTcount: A:0.29, C:0.00, G:0.13, T:0.58
Consensus pattern (16 bp):
GTGTTAATATTATTAT
Found at i:44395 original size:18 final size:17
Alignment explanation
Indices: 44367--44401 Score: 52
Period size: 18 Copynumber: 2.0 Consensus size: 17
44357 CGTTAATAAT
44367 TCGAGTCGAGTTCGAGC
1 TCGAGTCGAGTTCGAGC
*
44384 TCGAGCTCGAGTTGGAGC
1 TCGAG-TCGAGTTCGAGC
44402 CCGTTCAAAT
Statistics
Matches: 16, Mismatches: 1, Indels: 1
0.89 0.06 0.06
Matches are distributed among these distances:
17 5 0.31
18 11 0.69
ACGTcount: A:0.17, C:0.23, G:0.37, T:0.23
Consensus pattern (17 bp):
TCGAGTCGAGTTCGAGC
Found at i:44939 original size:23 final size:23
Alignment explanation
Indices: 44913--44957 Score: 90
Period size: 23 Copynumber: 2.0 Consensus size: 23
44903 GAAAACAACT
44913 CTCAAGAAAACTCTCTAAATTCA
1 CTCAAGAAAACTCTCTAAATTCA
44936 CTCAAGAAAACTCTCTAAATTC
1 CTCAAGAAAACTCTCTAAATTC
44958 TCTAGTATTG
Statistics
Matches: 22, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
23 22 1.00
ACGTcount: A:0.42, C:0.27, G:0.04, T:0.27
Consensus pattern (23 bp):
CTCAAGAAAACTCTCTAAATTCA
Found at i:47180 original size:13 final size:13
Alignment explanation
Indices: 47162--47206 Score: 63
Period size: 13 Copynumber: 3.5 Consensus size: 13
47152 TGCGTCATAA
**
47162 ATTTATGACGTTC
1 ATTTATGACGCGC
*
47175 ATTTATGACACGC
1 ATTTATGACGCGC
47188 ATTTATGACGCGC
1 ATTTATGACGCGC
47201 ATTTAT
1 ATTTAT
47207 AACTTACATT
Statistics
Matches: 28, Mismatches: 4, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
13 28 1.00
ACGTcount: A:0.27, C:0.18, G:0.16, T:0.40
Consensus pattern (13 bp):
ATTTATGACGCGC
Found at i:47277 original size:85 final size:85
Alignment explanation
Indices: 47188--47353 Score: 271
Period size: 85 Copynumber: 2.0 Consensus size: 85
47178 TATGACACGC
*
47188 ATTTATGACGCGCATTTATAACTTACATTGCGCGTCATTGAAGCCCCCGTCATAAAT-AAAGATG
1 ATTTATGACACGCATTTATAACTTACATTGCGCGTCATTGAAGCCCCCGTCATAAATGAAA-ATG
*
47252 ACACACATTTGTGTGTCATAA
65 AAACACATTTGTGTGTCATAA
* * *
47273 ATTTATGACACGTATTTATGACTTACATTGCGTGTCATTGAAGCCCCCGTCATAAATGAAAATGA
1 ATTTATGACACGCATTTATAACTTACATTGCGCGTCATTGAAGCCCCCGTCATAAATGAAAATGA
47338 AACACATTTGTGTGTC
66 AACACATTTGTGTGTC
47354 GTGATTGTAT
Statistics
Matches: 75, Mismatches: 5, Indels: 2
0.91 0.06 0.02
Matches are distributed among these distances:
85 72 0.96
86 3 0.04
ACGTcount: A:0.31, C:0.20, G:0.17, T:0.32
Consensus pattern (85 bp):
ATTTATGACACGCATTTATAACTTACATTGCGCGTCATTGAAGCCCCCGTCATAAATGAAAATGA
AACACATTTGTGTGTCATAA
Found at i:47380 original size:2 final size:2
Alignment explanation
Indices: 47373--47429 Score: 114
Period size: 2 Copynumber: 28.5 Consensus size: 2
47363 TTTCGTGAAT
47373 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA
1 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA
47415 TA TA TA TA TA TA TA T
1 TA TA TA TA TA TA TA T
47430 TGTAGATTGA
Statistics
Matches: 55, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 55 1.00
ACGTcount: A:0.49, C:0.00, G:0.00, T:0.51
Consensus pattern (2 bp):
TA
Found at i:54109 original size:13 final size:13
Alignment explanation
Indices: 54091--54132 Score: 75
Period size: 13 Copynumber: 3.2 Consensus size: 13
54081 TGCTAACTTA
*
54091 TTGCACTGAAAGT
1 TTGCACCGAAAGT
54104 TTGCACCGAAAGT
1 TTGCACCGAAAGT
54117 TTGCACCGAAAGT
1 TTGCACCGAAAGT
54130 TTG
1 TTG
54133 GCCATGTTGG
Statistics
Matches: 28, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
13 28 1.00
ACGTcount: A:0.29, C:0.19, G:0.24, T:0.29
Consensus pattern (13 bp):
TTGCACCGAAAGT
Found at i:55455 original size:5 final size:5
Alignment explanation
Indices: 55155--55447 Score: 423
Period size: 5 Copynumber: 59.6 Consensus size: 5
55145 TAGTGGTGTT
55155 TATTA TATTA TATTA TATTA TA-TA TATTA TATTA TATTA TATTA TATTA
1 TATTA TATTA TATTA TATTA TATTA TATTA TATTA TATTA TATTA TATTA
55204 TA-TA TTATATA TATTA TATTA TATTA TATTA TATTA TATTA -ATTA TATTA
1 TATTA -TAT-TA TATTA TATTA TATTA TATTA TATTA TATTA TATTA TATTA
55254 TA-TA TATTA TATTA TATTA TATTA TATTA TA-TA T-TATA TATTA TATTA
1 TATTA TATTA TATTA TATTA TATTA TATTA TATTA TAT-TA TATTA TATTA
55302 TATTA TA-TA TATTA TATTA TA-TA TA-TA TTATTA TATTA TATTA TA-TA
1 TATTA TATTA TATTA TATTA TATTA TATTA -TATTA TATTA TATTA TATTA
55349 T-TATA TTATTA TATTA TATTA TATTA TATTA TATTA TATTA TA-T- TATTA
1 TAT-TA -TATTA TATTA TATTA TATTA TATTA TATTA TATTA TATTA TATTA
55398 TATTTA TATTA TATTA TATTA TATTTA TATTA TATTA TATTA TATTA TAT
1 TA-TTA TATTA TATTA TATTA TA-TTA TATTA TATTA TATTA TATTA TAT
55448 ATTATATTTT
Statistics
Matches: 268, Mismatches: 0, Indels: 40
0.87 0.00 0.13
Matches are distributed among these distances:
3 2 0.01
4 32 0.12
5 212 0.79
6 19 0.07
7 3 0.01
ACGTcount: A:0.41, C:0.00, G:0.00, T:0.59
Consensus pattern (5 bp):
TATTA
Done.