Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005414.1 Hibiscus syriacus cultivar Beakdansim tig00012412_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52093

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4074--4100
12
2.2
12
100
0
54
25
37
22
14
1.93
16487--16527
19
2.1
20
86
4
57
60
14
0
24
1.34
19292--19342
25
2.0
25
81
7
59
58
1
3
35
1.28
19351--19389
20
2.0
20
85
10
53
51
2
7
38
1.44
25920--25966
19
2.5
19
96
0
85
27
21
19
31
1.97
26026--26143
50
2.4
50
85
2
148
17
32
30
19
1.95
29905--29943
17
2.4
16
84
12
53
66
5
0
28
1.12
31983--32203
110
2.0
111
92
0
372
46
9
8
35
1.66
36610--36702
29
3.2
28
75
4
96
50
2
2
45
1.25
38349--38401
22
2.5
22
96
3
99
20
7
35
35
1.81
44955--44982
2
14.0
2
100
0
56
50
0
0
50
1.00
46620--46656
18
2.1
18
89
0
56
45
2
10
40
1.53

Tables:   1

The End!