Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005426.1 Hibiscus syriacus cultivar Beakdansim tig00012442_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63889

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6883--6924
20
2.1
20
95
0
75
30
7
11
50
1.66
26571--26624
20
2.7
20
77
11
56
64
5
3
25
1.32
27715--27786
3
24.0
3
88
5
101
61
0
0
38
0.96
28045--28650
113
5.3
113
95
1
1054
27
18
15
38
1.91
28019--28650
341
1.9
335
92
3
1059
26
18
15
38
1.91
28591--28690
40
2.5
40
91
0
155
20
20
9
51
1.74
28476--28809
153
2.2
155
89
2
494
26
20
11
41
1.86
28633--29172
113
4.8
113
89
1
755
27
19
14
37
1.91
29576--29630
22
2.5
22
87
0
83
36
14
14
34
1.87
30904--31074
76
2.3
76
84
1
209
33
23
12
30
1.92
35719--35757
14
2.8
14
88
0
60
53
5
12
28
1.60
39214--39243
15
2.0
15
100
0
60
26
26
20
26
1.99
39390--39458
3
23.0
3
88
5
104
62
0
0
37
0.96
39394--39466
12
5.4
14
76
17
66
64
0
0
35
0.94
39391--39470
9
8.5
10
76
17
75
65
0
0
35
0.93
42443--42664
113
2.0
113
87
1
320
42
14
9
33
1.78
60090--60253
31
5.3
30
76
3
148
15
23
29
31
1.96

Tables:   1

The End!