Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005428.1 Hibiscus syriacus cultivar Beakdansim tig00012445_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61271

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6857--6896
3
13.3
3
100
0
80
67
0
0
32
0.91
7353--7427
23
3.2
22
74
14
71
53
1
1
44
1.17
8333--8359
6
4.5
6
100
0
54
51
48
0
0
1.00
13177--13222
2
23.0
2
100
0
92
50
0
0
50
1.00
17773--17818
22
2.1
22
87
0
65
56
6
6
30
1.50
21135--21186
15
3.5
15
73
23
56
26
5
1
65
1.26
23786--23825
6
6.0
7
83
16
50
12
17
10
60
1.59
23881--23950
35
2.0
34
86
2
95
18
12
10
58
1.62
26360--26398
14
2.8
14
88
0
51
82
0
12
5
0.83
28526--28702
75
2.4
75
85
1
257
31
15
23
29
1.95
29572--29727
53
2.9
53
86
4
215
37
14
20
27
1.91
30097--30215
22
5.4
22
85
2
166
36
12
10
40
1.78
30860--31212
45
7.8
45
91
0
535
25
21
19
33
1.97
31200--31274
31
2.4
31
100
0
150
25
12
21
41
1.87
31154--31349
106
1.8
107
95
1
358
25
17
21
35
1.95
31231--31393
75
2.2
76
97
1
310
24
18
22
34
1.96
31336--31494
45
3.5
45
92
1
264
25
21
21
32
1.98
31398--31693
115
2.5
115
86
4
398
30
20
19
29
1.97
31823--31853
3
10.0
3
93
6
53
35
0
0
64
0.94
33193--33238
24
2.0
23
82
4
56
36
2
2
58
1.22
33371--33407
2
18.5
2
100
0
74
51
0
0
48
1.00
33692--33732
18
2.3
18
88
12
59
39
0
0
60
0.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38305--38336
4
8.0
4
92
0
55
21
0
28
50
1.49
49135--49162
14
2.0
14
100
0
56
28
21
28
21
1.99
57815--57870
21
2.7
21
81
15
71
0
7
16
76
0.99
57815--57870
10
5.4
11
76
16
57
0
7
16
76
0.99
57827--57870
9
4.6
9
83
10
52
0
6
13
79
0.92

Tables:   1

The End!