Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000543.1 Hibiscus syriacus cultivar Beakdansim tig00001053_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66850

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1895--1973
41
1.9
41
97
0
149
58
3
6
31
1.41
3464--3500
17
2.2
17
90
0
56
62
8
5
24
1.44
5181--5210
14
2.1
15
93
6
53
60
0
6
33
1.23
5359--5402
4
11.0
4
85
0
52
40
0
6
52
1.28
5359--5402
6
7.3
6
86
0
52
40
0
6
52
1.28
8024--8141
39
3.0
39
88
0
182
34
21
16
27
1.94
8029--8174
78
1.9
78
82
2
186
30
19
17
32
1.95
19773--19846
31
2.4
31
81
2
85
31
27
20
21
1.98
20545--20591
18
2.6
18
76
6
51
25
21
29
23
1.99
25261--25306
24
1.9
24
86
0
65
32
23
26
17
1.97
25297--25399
23
4.5
23
74
7
75
40
20
21
17
1.91
28644--28677
18
1.9
18
88
5
52
44
2
17
35
1.64
29128--29206
20
3.9
19
74
19
54
13
24
36
25
1.92
29147--29207
20
2.9
20
85
7
59
16
26
34
22
1.95
41825--41949
23
5.4
23
76
6
85
36
24
22
16
1.94
45183--45214
2
16.0
2
100
0
64
50
50
0
0
1.00
45214--45251
2
19.0
2
100
0
76
50
0
0
50
1.00
51220--51268
21
2.3
21
100
0
98
36
20
18
24
1.94
56222--56257
17
2.1
17
89
0
54
22
0
25
52
1.47
56271--56319
13
3.8
13
79
15
57
38
2
2
57
1.22
57653--57677
6
4.2
6
100
0
50
16
0
36
48
1.46
59697--60261
113
5.1
112
86
5
780
25
14
13
46
1.81

Tables:   1

The End!