Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005430.1 Hibiscus syriacus cultivar Beakdansim tig00012451_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63436

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2282--2442
83
1.9
83
85
5
218
29
18
20
31
1.96
8030--8063
17
2.0
17
88
0
50
47
0
0
52
1.00
10994--11039
23
2.0
23
100
0
92
34
30
26
8
1.86
16355--16394
21
1.9
21
89
0
62
10
25
40
25
1.86
16378--16436
22
2.7
22
100
0
118
20
27
30
22
1.98
26743--26769
2
13.5
2
100
0
54
51
0
0
48
1.00
30763--30838
31
2.5
31
84
0
89
30
19
14
35
1.92
42596--42680
41
2.1
41
88
4
127
23
10
35
30
1.89
44511--44547
15
2.5
15
87
12
58
62
0
2
35
1.10
50200--50291
3
30.7
3
93
0
157
63
0
3
33
1.11
50431--51758
113
11.7
113
88
4
1653
29
18
14
37
1.90
50431--51760
450
2.9
450
88
6
1888
29
18
14
37
1.90
52159--52213
22
2.5
22
90
0
92
38
14
12
34
1.84
52600--52679
40
2.0
40
92
0
133
28
20
16
35
1.94
54801--55126
114
2.9
114
91
1
494
33
19
14
33
1.92
55033--55221
95
2.0
93
88
4
281
33
19
14
33
1.91

Tables:   1

The End!