Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005432.1 Hibiscus syriacus cultivar Beakdansim tig00012453_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44303

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1920--1984
30
2.2
30
86
2
87
38
6
18
36
1.76
4935--4978
21
2.1
21
86
0
61
29
22
18
29
1.97
5882--5942
21
2.9
21
79
13
63
27
27
19
24
1.99
6069--6105
14
2.6
14
95
0
65
32
18
0
48
1.49
8670--8756
20
4.4
20
76
11
90
1
19
0
79
0.80
8654--8756
18
6.1
17
71
11
79
1
18
0
79
0.82
8655--8756
32
3.4
31
76
19
108
1
18
0
79
0.83
8655--8755
34
2.8
34
76
18
98
1
18
0
79
0.83
14367--14399
15
2.2
15
100
0
66
12
6
33
48
1.65
17565--17624
30
2.0
30
93
0
102
33
23
3
40
1.71
23718--23745
8
3.5
8
100
0
56
21
25
28
25
1.99
23735--23775
20
2.0
20
86
9
57
24
21
24
29
1.99
24387--24496
23
4.7
23
81
9
125
29
22
26
21
1.99
24700--24762
30
2.1
30
87
0
90
33
25
4
36
1.77
29687--29719
15
2.1
16
88
5
50
57
9
3
30
1.45
33120--33148
14
2.1
14
100
0
58
13
31
6
48
1.69
34023--34068
23
2.0
23
86
0
65
30
26
23
19
1.98
34655--34810
64
2.5
62
81
9
163
27
18
20
33
1.96
36879--36922
23
2.0
22
86
4
61
22
38
13
25
1.91

Tables:   1

The End!