Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005437.1 Hibiscus syriacus cultivar Beakdansim tig00012464_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74830

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4392--4435
2
22.0
2
100
0
88
50
0
0
50
1.00
9435--9510
36
2.1
36
97
0
143
31
10
14
43
1.79
10922--10988
22
3.0
21
75
18
64
41
1
1
55
1.18
10917--10991
23
3.2
23
76
14
82
44
1
1
53
1.17
11446--11485
3
13.3
3
100
0
80
32
0
0
67
0.91
12116--12145
2
15.0
2
100
0
60
50
0
0
50
1.00
17108--17138
7
4.4
7
91
0
53
29
0
70
0
0.87
17356--17436
15
5.5
15
77
10
60
35
4
3
55
1.39
19481--19635
31
5.0
31
93
0
267
36
20
18
24
1.94
29074--29166
44
2.1
44
97
0
177
17
35
22
24
1.95
37658--37686
3
9.7
3
100
0
58
34
0
0
65
0.93
38436--38471
18
1.9
19
88
5
56
61
0
5
33
1.19
39778--39841
27
2.3
28
84
10
78
51
0
1
46
1.10
40211--40268
20
2.9
20
94
5
100
46
8
0
44
1.34
48431--48466
14
2.7
13
87
8
54
50
0
2
47
1.15
52849--52882
16
2.2
16
89
5
52
35
0
17
47
1.48
54447--54478
15
2.1
15
94
0
55
40
6
31
21
1.78
55049--55485
155
2.8
156
87
4
616
48
5
18
27
1.71
59812--60029
103
2.1
103
94
0
382
26
12
23
37
1.91
60053--60113
23
2.7
23
89
0
86
21
22
26
29
1.99
68631--68679
23
2.1
23
85
7
64
59
12
2
26
1.44
72983--73184
101
2.0
99
92
1
332
26
12
24
37
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
73218--73270
22
2.4
22
87
0
70
20
26
28
24
1.99

Tables:   1

The End!