Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005446.1 Hibiscus syriacus cultivar Beakdansim tig00012479_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57091

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3993--4048
18
2.9
19
84
10
78
17
23
32
26
1.97
4610--4654
22
2.0
22
91
0
72
20
20
33
26
1.97
9633--9669
14
2.6
14
95
0
65
37
18
21
21
1.94
16474--16544
4
16.5
4
77
13
70
74
1
4
19
1.06
16474--16549
18
4.4
17
78
8
73
75
2
3
18
1.08
16480--16544
26
2.5
25
85
9
87
75
1
3
20
1.02
16435--16544
30
3.6
30
75
12
98
72
2
7
17
1.19
18100--18525
106
4.0
106
93
1
721
21
18
25
35
1.95
19948--19983
18
2.0
18
94
0
63
41
33
8
16
1.78
21050--21106
18
3.1
19
75
10
73
0
14
7
78
0.94
21050--21112
16
3.8
16
78
17
74
0
14
7
77
0.97
21062--21099
11
3.7
10
83
16
51
0
13
7
78
0.94
24566--24620
10
5.4
10
82
8
67
72
0
3
23
1.00
25866--25892
2
13.5
2
100
0
54
51
0
0
48
1.00
27013--27064
11
4.7
11
75
15
54
30
0
0
69
0.89
27013--27056
12
3.8
12
81
3
54
31
0
0
68
0.90
28372--28396
4
6.2
4
100
0
50
24
28
0
48
1.52
39619--39709
20
4.9
20
68
20
72
34
5
15
45
1.69
44219--44302
20
4.0
20
76
22
91
35
5
14
44
1.69
47703--47772
2
35.0
2
100
0
140
0
50
0
50
1.00
51714--51751
2
19.0
2
100
0
76
50
0
0
50
1.00
52023--52127
48
2.2
48
98
1
203
38
27
18
16
1.91

Tables:   1

The End!