Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005448.1 Hibiscus syriacus cultivar Beakdansim tig00012482_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52188

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
601--663
23
2.7
23
87
0
90
17
28
23
30
1.97
4407--4456
19
2.6
19
100
0
100
30
18
30
22
1.97
4405--4502
19
4.7
22
81
10
86
33
18
24
23
1.97
6039--6099
23
2.7
23
86
0
95
18
22
27
31
1.97
24258--24296
18
2.2
17
86
4
51
38
0
0
61
0.96
24661--24697
19
1.9
19
94
0
65
37
10
2
48
1.52
25908--25963
14
4.3
14
76
17
66
10
12
23
53
1.69
25915--25984
24
2.9
24
87
4
97
12
10
18
58
1.62
26707--26781
10
7.7
10
69
21
61
9
12
21
57
1.62
26713--26777
16
4.1
16
95
0
121
7
12
23
56
1.61
26847--26879
16
2.1
16
100
0
66
6
12
24
57
1.57
43428--43690
140
1.9
140
87
3
386
35
14
20
28
1.93
48080--48140
15
4.2
15
85
2
81
34
16
6
42
1.74
48080--48135
29
1.9
29
89
7
87
35
16
5
42
1.70

Tables:   1

The End!