Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005450.1 Hibiscus syriacus cultivar Beakdansim tig00012484_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  86092

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1107--1195
35
2.3
42
70
27
111
48
4
10
37
1.57
1118--1185
35
1.9
35
100
0
136
44
5
11
38
1.65
34003--34399
204
1.9
204
83
2
501
39
17
13
29
1.88
36476--36507
6
5.3
6
92
0
55
37
0
62
0
0.95
46121--46294
95
1.8
95
88
3
269
40
14
10
33
1.81
46746--46818
32
2.3
32
78
0
83
28
17
17
35
1.93
51608--51659
22
2.3
22
83
9
61
48
3
0
48
1.20
70402--70505
47
2.3
44
79
9
113
38
22
14
25
1.91
73191--73304
21
5.4
21
70
15
101
21
21
22
34
1.97
73182--73318
42
3.3
42
95
0
247
23
21
19
35
1.96
74040--74064
6
4.2
6
100
0
50
0
16
48
36
1.46
74161--74211
21
2.4
21
83
0
66
29
29
19
21
1.98
74196--74254
29
2.0
29
93
0
100
37
11
20
30
1.89
74981--75159
20
8.9
20
72
12
116
40
21
20
17
1.91
75065--75172
40
2.7
40
92
0
180
37
23
22
16
1.93
75039--75159
60
2.0
61
88
6
183
38
23
21
17
1.93
75043--75172
20
6.4
20
77
8
129
37
24
20
16
1.93
75283--75321
6
6.5
6
100
0
78
33
51
15
0
1.44
76068--76105
6
6.5
6
96
3
69
0
15
52
31
1.43
76216--76447
20
11.4
20
83
9
222
16
21
24
37
1.93
76216--76447
40
5.7
40
88
5
263
16
21
24
37
1.93
76199--76528
82
4.1
83
76
14
275
15
20
23
40
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
76228--76528
20
14.9
20
78
13
205
16
20
23
39
1.92
76815--76866
6
8.7
6
91
0
86
51
13
15
19
1.75

Tables:   1

The End!