Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005452.1 Hibiscus syriacus cultivar Beakdansim tig00012491_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58300

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5898--6346
138
3.3
137
94
1
769
21
21
24
31
1.98
10408--10465
21
2.7
21
76
12
64
48
17
6
27
1.72
26833--26896
32
2.0
31
85
14
87
64
0
0
35
0.94
27298--27442
36
4.0
36
87
0
200
33
5
21
40
1.76
27298--27442
72
2.0
72
90
2
229
33
5
21
40
1.76
43857--43901
23
2.0
23
90
0
72
24
26
26
22
2.00
45595--45755
64
2.5
63
84
8
191
26
21
18
34
1.96
47674--47727
24
2.2
24
100
0
108
40
25
9
24
1.85
49092--49136
23
2.0
23
90
0
72
24
26
26
22
2.00
50829--50989
64
2.5
63
85
8
200
26
21
18
33
1.96
53040--53073
5
6.8
5
100
0
68
61
20
0
17
1.34

Tables:   1

The End!