Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005455.1 Hibiscus syriacus cultivar Beakdansim tig00012494_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  111463

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18589--18719
33
4.0
33
89
0
199
12
6
51
29
1.63
18639--18695
18
3.3
18
63
22
50
5
8
54
31
1.53
19148--19335
63
3.0
61
81
7
198
28
26
21
23
1.99
28386--28457
22
3.1
22
75
19
74
33
12
20
33
1.90
32459--32504
22
2.0
22
83
12
56
41
8
4
45
1.55
34344--34372
8
3.8
8
95
4
51
55
0
44
0
0.99
38947--39012
21
3.2
21
68
8
55
39
15
15
30
1.88
44573--44626
16
3.6
16
73
9
51
57
18
3
20
1.55
47588--47647
27
2.2
28
84
3
86
33
0
13
53
1.40
51934--52559
128
4.9
128
96
0
1150
23
24
19
32
1.98
52814--52843
14
2.1
14
93
0
51
30
0
10
60
1.30
52959--53059
34
3.0
34
85
0
139
38
2
3
54
1.34
53579--53672
21
4.5
21
89
5
136
21
27
34
17
1.95
55390--55444
17
3.3
15
73
22
56
54
1
0
43
1.10
55372--55484
35
3.4
34
83
9
135
58
0
0
40
1.04
55392--55455
18
3.6
18
67
26
55
54
1
0
43
1.09
55375--55481
15
6.7
15
67
17
54
57
0
0
41
1.05
55377--55484
33
3.2
33
82
8
130
58
0
0
40
1.04
55694--55793
51
2.0
51
86
4
139
19
33
31
17
1.94
56557--56596
21
1.9
21
84
0
53
35
12
15
37
1.85
64153--64194
21
2.0
21
95
0
75
30
14
7
47
1.71
64189--64287
33
3.0
33
94
1
164
32
7
15
45
1.73
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65060--65113
21
2.6
21
96
0
99
16
24
40
18
1.90
65559--65590
16
2.0
17
88
11
50
43
21
21
12
1.86
75631--75680
15
3.2
16
72
8
50
30
6
2
62
1.31
83273--83327
29
1.9
29
92
3
94
25
3
9
61
1.42
83948--84012
32
2.0
32
100
0
130
43
12
12
32
1.79
84888--84927
21
1.9
21
85
10
55
60
0
0
40
0.97
88745--88812
31
2.2
31
83
0
82
29
25
7
38
1.83
88965--89134
60
2.9
59
83
6
200
41
5
21
32
1.75
98767--98795
2
14.5
2
100
0
58
48
0
0
51
1.00

Tables:   1

The End!