Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005461.1 Hibiscus syriacus cultivar Beakdansim tig00012504_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  104619

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
232--332
53
1.9
53
91
4
168
27
23
10
37
1.88
69--447
166
2.2
168
92
6
631
27
21
11
39
1.88
285--881
113
5.3
113
94
0
982
28
19
14
37
1.91
1470--2288
52
15.7
52
94
2
1346
38
22
15
24
1.92
1470--2288
155
5.2
156
93
3
1380
38
22
15
24
1.92
1470--2288
207
3.9
208
93
2
1405
38
22
15
24
1.92
3230--3334
1
105.0
1
71
0
66
0
15
0
84
0.62
3230--3334
9
12.2
9
76
9
96
0
15
0
84
0.62
3230--3328
25
4.2
23
80
15
114
0
16
0
83
0.64
3229--3333
21
5.2
21
77
16
89
0
16
0
83
0.64
3231--3337
13
8.2
13
78
9
110
0
15
0
84
0.63
3232--3337
27
4.1
25
77
11
115
0
16
0
83
0.64
14663--14712
19
2.5
19
87
12
66
68
4
0
28
1.08
15521--15578
28
2.0
28
83
9
73
0
13
12
74
1.08
15948--16080
3
43.7
3
89
3
203
63
2
0
33
1.12
22350--22397
2
24.0
2
100
0
96
50
0
0
50
1.00
33565--33590
7
3.7
7
100
0
52
57
0
15
26
1.38
44888--44952
26
2.5
26
87
0
103
16
12
36
33
1.87
48943--48969
7
3.9
7
100
0
54
59
0
11
29
1.32
52682--52724
2
21.5
2
100
0
86
48
0
0
51
1.00
53121--53149
13
2.1
14
93
6
51
20
0
20
58
1.39
55153--55199
21
2.2
21
85
7
60
19
10
10
59
1.59
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57397--57450
27
2.0
26
85
3
72
40
5
16
37
1.72
58461--58548
30
2.9
30
94
0
149
42
25
28
4
1.74
59733--59773
3
13.7
3
100
0
82
34
0
0
65
0.93
71337--71377
16
2.5
17
88
4
57
24
21
26
26
2.00
71355--71513
64
2.5
65
84
7
184
26
18
23
31
1.98
74025--74077
10
5.0
11
75
25
60
33
5
47
13
1.66
74024--74077
21
2.6
21
100
0
108
33
5
48
12
1.65
76181--76260
29
2.7
30
79
13
85
50
1
8
40
1.42
76295--76338
22
2.1
20
87
8
61
65
0
4
29
1.12
78716--78743
2
14.0
2
100
0
56
50
0
0
50
1.00
85684--85709
4
6.5
4
100
0
52
73
0
26
0
0.84
87718--87747
15
2.0
15
100
0
60
46
13
20
20
1.83
96643--96676
16
2.1
16
88
0
50
20
32
5
41
1.76
100541--100587
21
2.2
21
84
0
58
27
10
38
23
1.88

Tables:   1

The End!