Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005462.1 Hibiscus syriacus cultivar Beakdansim tig00012506_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47455

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2249--2304
21
2.6
22
88
2
78
23
28
19
28
1.98
2253--2305
22
2.5
21
87
3
70
22
28
22
26
1.99
4019--4068
20
2.4
21
80
6
57
30
14
18
38
1.89
4145--4194
21
2.5
19
78
15
55
30
16
24
30
1.96
4153--4195
21
2.0
22
90
4
70
25
18
27
27
1.98
4246--4317
21
3.6
20
81
9
76
34
19
13
31
1.91
5493--5517
6
4.2
6
100
0
50
64
16
20
0
1.30
16540--16579
21
1.9
22
90
10
66
12
10
37
40
1.77
18784--18830
18
2.6
18
83
12
53
12
25
0
61
1.31
20234--20282
19
2.5
20
80
9
57
34
12
16
36
1.86
20596--20628
16
2.1
16
88
11
50
21
18
9
51
1.73
20999--22337
4
335.2
4
97
0
2259
46
25
2
25
1.66
22335--22425
2
47.0
2
67
18
50
43
4
4
47
1.43
22395--22425
11
2.8
11
90
0
53
48
0
0
51
1.00
23444--23499
21
2.7
21
100
0
112
28
25
23
23
1.99
29270--29337
22
3.1
22
79
8
59
39
20
14
25
1.91
30700--30762
15
4.2
15
81
6
83
42
6
15
34
1.73
30705--30762
29
1.9
31
89
6
93
43
5
15
36
1.69
32684--32709
11
2.4
11
100
0
52
80
0
0
19
0.71
35192--35457
140
1.9
140
86
3
383
28
20
15
36
1.93

Tables:   1

The End!