Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005463.1 Hibiscus syriacus cultivar Beakdansim tig00012511_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55979

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3275--3314
14
3.1
13
82
10
55
60
0
0
40
0.97
4713--4763
3
17.0
3
91
0
84
62
1
0
35
1.06
4928--6299
76
18.0
76
96
1
2338
36
20
20
22
1.96
6973--7052
22
3.6
22
72
0
79
40
12
12
35
1.81
9766--9957
93
2.1
93
87
3
280
37
20
13
28
1.90
12051--12085
10
3.4
10
92
7
61
0
8
0
91
0.42
12051--12085
11
3.3
11
96
4
63
0
8
0
91
0.42
12045--12089
18
2.5
18
89
7
65
0
13
0
86
0.57
16744--16810
28
2.2
29
82
10
73
59
0
7
32
1.25
16759--16802
19
2.3
19
84
7
54
61
0
6
31
1.22
18938--18982
3
15.0
3
90
0
72
62
2
0
35
1.08
18972--19005
17
2.1
16
88
5
50
82
2
0
14
0.79
24381--24422
15
2.9
15
85
3
50
19
14
33
33
1.91
29184--29235
25
2.0
25
82
10
61
78
0
15
5
0.92
33717--33770
21
2.5
22
77
17
60
46
1
3
48
1.30
36631--36688
22
2.6
21
76
10
53
41
0
1
56
1.09
38400--38443
20
2.2
20
87
0
61
34
13
22
29
1.93
39397--39429
12
2.5
13
90
9
50
24
6
3
66
1.28
46172--46206
16
2.2
16
89
0
52
34
5
5
54
1.48
47977--48045
30
2.3
30
80
14
81
26
5
21
46
1.74
48343--48383
21
2.0
20
85
4
55
31
9
0
58
1.31
49535--49581
19
2.5
19
80
13
53
21
2
4
72
1.12
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
52545--52574
15
2.1
15
93
6
53
26
33
20
20
1.97

Tables:   1

The End!