Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005471.1 Hibiscus syriacus cultivar Beakdansim tig00012532_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70732

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2310--2348
13
3.1
12
82
10
51
35
10
7
46
1.67
3887--3911
13
1.9
13
100
0
50
28
0
16
56
1.41
4063--4095
12
2.6
13
85
9
50
42
9
6
42
1.61
6960--7006
24
2.0
24
87
8
69
57
12
8
21
1.62
10071--10099
13
2.1
14
93
6
51
13
20
17
48
1.81
10300--10342
3
13.7
3
90
9
52
67
0
0
32
0.91
10302--10382
8
9.9
8
72
17
60
60
1
2
35
1.18
10300--10347
23
2.2
20
85
10
60
66
2
0
31
1.03
12450--12495
23
2.0
23
87
8
67
45
4
17
32
1.68
15646--15683
18
2.1
18
100
0
76
34
5
0
60
1.19
16102--16143
11
3.8
11
96
0
75
23
26
11
38
1.90
20361--20400
21
1.9
21
89
0
62
10
25
40
25
1.86
20383--20440
23
2.8
21
84
12
75
18
25
34
20
1.96
25651--25705
20
2.7
20
82
2
74
16
21
43
18
1.88
33886--33924
20
2.0
20
85
5
53
51
10
0
38
1.36
41236--41653
224
1.9
225
80
3
493
32
20
18
28
1.96
41236--41716
224
2.1
224
78
6
488
32
21
17
28
1.96
46719--46878
65
2.5
65
91
3
261
32
22
16
28
1.95
52651--52700
24
2.1
24
85
7
66
26
2
12
60
1.43
54028--54077
24
2.1
24
85
7
66
26
2
12
60
1.43
54552--54585
17
2.1
16
88
5
50
14
8
0
76
1.01
64785--64818
17
2.1
16
88
5
50
14
8
0
76
1.01

Tables:   1

The End!