Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005475.1 Hibiscus syriacus cultivar Beakdansim tig00012551_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61869

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7354--7414
18
3.4
18
97
0
113
8
32
27
31
1.86
17594--17631
18
2.1
19
85
5
51
50
7
5
36
1.54
26410--26458
24
2.0
24
100
0
98
38
8
8
44
1.64
28265--28454
84
2.3
83
84
9
208
32
1
14
52
1.51
34522--34586
5
12.4
5
73
12
51
18
4
3
73
1.13
34557--34583
14
1.9
14
100
0
54
18
0
0
81
0.69
37152--37199
8
5.9
8
78
11
53
25
2
2
70
1.09
38832--39193
42
8.6
42
88
1
510
35
23
22
19
1.96
41883--42227
42
8.1
42
89
2
431
35
23
21
19
1.96
44847--44893
18
2.6
18
82
0
58
19
46
19
14
1.84
44891--44929
7
5.4
7
93
6
69
12
33
28
25
1.93
44891--44938
15
3.1
15
91
8
71
12
33
29
25
1.92
46912--46998
24
3.7
23
81
3
84
20
13
18
47
1.83
46915--47005
47
1.9
48
84
10
125
19
14
17
48
1.81
46936--47007
24
3.0
24
83
2
92
20
11
18
50
1.77
49215--49256
20
2.1
20
82
8
50
47
4
11
35
1.61
57519--57560
22
1.9
22
95
0
75
23
21
19
35
1.96
57526--57573
22
2.1
22
88
3
69
27
18
20
33
1.96

Tables:   1

The End!