Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005476.1 Hibiscus syriacus cultivar Beakdansim tig00012561_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65958

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10946--11135
45
4.2
45
91
2
274
12
7
48
32
1.68
11323--11377
27
2.0
27
100
0
110
29
9
40
21
1.84
15745--15786
22
1.9
22
90
0
66
21
30
26
21
1.98
15827--15880
21
2.6
21
87
0
81
20
42
22
14
1.88
25373--25404
16
2.1
16
88
11
50
28
6
28
37
1.81
29648--29730
29
2.8
29
92
1
139
43
9
14
32
1.78
34415--34497
29
2.8
29
92
1
139
43
9
14
32
1.78
35952--36029
30
2.8
26
72
20
70
64
0
0
35
0.94
48745--48773
14
2.1
14
100
0
58
58
0
0
41
0.98
56760--56788
2
14.5
2
100
0
58
51
0
0
48
1.00
57177--57262
43
2.0
43
100
0
172
34
6
23
34
1.82

Tables:   1

The End!