Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005478.1 Hibiscus syriacus cultivar Beakdansim tig00012563_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63370

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3896--3972
22
3.5
22
85
0
109
20
22
28
28
1.98
3888--3972
44
1.9
44
87
0
125
21
22
28
28
1.99
7431--7552
40
3.0
40
98
0
235
23
17
26
32
1.96
7657--7775
47
2.6
45
84
5
157
40
7
21
31
1.81
9348--9393
21
2.1
21
88
4
65
69
0
15
15
1.19
9664--9730
23
3.0
23
75
14
54
65
5
4
23
1.34
33931--33959
13
2.2
13
100
0
58
13
0
0
86
0.58
50082--50118
17
2.1
18
85
14
51
45
29
0
24
1.53
50722--50756
12
2.9
12
91
0
52
37
25
5
31
1.80
51317--51352
18
1.9
19
88
5
56
30
16
2
50
1.60
53599--53686
2
44.0
2
100
0
176
50
0
0
50
1.00
55275--55310
17
2.1
17
94
0
63
30
22
13
33
1.93
57685--57725
21
2.0
21
85
9
57
4
19
0
75
0.98
57848--57902
18
3.1
18
100
0
110
29
10
10
49
1.72
60297--60364
30
2.3
30
89
0
100
33
11
23
30
1.91

Tables:   1

The End!