Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005487.1 Hibiscus syriacus cultivar Beakdansim tig00012611_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  79521

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1883--1976
14
6.6
14
71
9
57
61
10
11
15
1.56
8412--8519
47
2.5
41
77
18
112
36
7
3
52
1.47
9470--9515
24
1.9
24
86
8
67
52
0
0
47
1.00
9525--9584
22
2.8
21
78
9
59
65
3
1
30
1.19
18777--18818
20
2.0
21
86
9
59
28
33
2
35
1.70
20470--20515
23
2.0
23
100
0
92
26
26
17
30
1.97
32176--32215
21
1.9
21
89
0
62
25
40
25
10
1.86
35695--35729
18
1.9
18
94
0
61
31
22
31
14
1.94
36527--36566
11
3.4
11
81
18
53
77
2
7
12
1.07
38667--38707
22
2.0
22
85
9
59
31
31
2
34
1.71
41376--41414
21
1.9
20
89
5
60
46
12
2
38
1.56
42348--42389
22
2.0
22
86
9
61
28
35
2
33
1.70
46791--46836
24
1.9
24
90
0
74
15
21
30
32
1.94
48954--49045
31
3.1
30
82
4
114
43
3
4
48
1.38
55005--55041
15
2.5
15
100
0
74
24
16
37
21
1.93
56160--56211
27
1.9
29
85
14
76
46
13
5
34
1.67
58333--58369
14
2.6
15
83
8
51
10
0
5
83
0.79
61081--61134
23
2.3
23
90
0
90
42
7
5
44
1.55
66099--66182
31
2.7
31
75
0
87
33
17
11
36
1.87
70646--70701
28
2.0
28
100
0
112
17
14
28
39
1.89
74389--74595
111
1.9
112
86
8
280
56
6
6
29
1.51

Tables:   1

The End!