Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005500.1 Hibiscus syriacus cultivar Beakdansim tig00012659_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60276

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18408--18462
2
28.0
2
96
3
103
49
0
0
50
1.00
23360--23404
20
2.2
20
92
0
72
37
13
22
26
1.91
26531--26562
14
2.3
14
94
0
55
50
0
6
43
1.27
27222--27266
3
15.0
3
100
0
90
33
0
0
66
0.92
28261--28310
2
25.0
2
100
0
100
50
0
0
50
1.00
30251--30284
7
5.1
7
92
7
54
67
0
0
32
0.91
30417--30505
45
2.0
45
100
0
178
34
20
22
22
1.96
30523--32020
46
32.0
46
93
2
2415
33
18
21
26
1.97
30523--32020
188
8.0
187
95
1
2503
33
18
21
26
1.97
30523--32020
234
6.4
231
93
2
2421
33
18
21
26
1.97
32695--32773
22
3.6
21
74
14
79
40
13
12
32
1.83
34118--34257
75
1.9
74
82
5
174
32
22
13
31
1.93
43917--43949
17
1.9
17
88
11
50
6
33
0
60
1.21
44775--44831
3
19.0
3
89
7
89
64
0
0
35
0.93
47352--47387
15
2.5
14
86
8
54
47
0
0
52
1.00
47357--47387
15
2.1
15
94
5
55
41
0
0
58
0.98
47470--47496
2
13.5
2
100
0
54
51
0
0
48
1.00
48155--48184
2
15.0
2
100
0
60
50
0
0
50
1.00
51766--51812
18
2.4
19
86
10
60
29
17
27
25
1.97
52578--52669
46
2.0
46
100
0
184
19
4
28
47
1.68
54423--54457
10
3.7
10
85
14
56
11
42
20
25
1.85
54424--54459
18
2.0
18
100
0
72
11
44
22
22
1.84

Tables:   1

The End!