Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005504.1 Hibiscus syriacus cultivar Beakdansim tig00012685_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66788

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6551--6825
41
6.7
40
72
13
166
33
15
17
33
1.91
6932--7100
41
4.1
41
73
7
137
26
19
15
37
1.92
7970--8037
32
2.1
32
88
0
100
39
32
14
13
1.85
9149--9186
19
2.1
19
95
5
69
15
52
21
10
1.72
9187--9337
29
5.2
29
82
5
180
27
2
19
50
1.61
15632--15703
29
2.4
32
86
9
98
40
2
19
37
1.66
16347--16390
19
2.3
20
84
7
56
13
36
29
20
1.91
16383--16436
23
2.3
23
84
6
74
16
51
20
11
1.74
16413--16442
13
2.3
13
94
0
51
16
43
23
16
1.87
16444--16651
29
7.1
29
93
2
330
30
1
19
48
1.60
19972--20006
2
17.5
2
100
0
70
51
0
0
48
1.00
20394--20458
23
2.8
23
79
9
78
18
23
24
33
1.96
26613--26655
23
1.9
22
86
13
61
23
6
9
60
1.51
43220--43271
18
2.9
18
97
0
95
28
32
21
17
1.96
43335--43386
25
2.0
26
82
14
63
28
23
1
46
1.63
43839--43875
13
2.8
13
100
0
74
45
13
0
40
1.43
53060--53102
22
2.0
21
86
8
61
41
9
9
39
1.69
53220--53364
30
4.7
30
78
8
139
32
15
24
28
1.95
53990--54050
27
2.3
27
100
0
122
39
0
14
45
1.45
54605--55980
182
7.6
182
91
1
2037
28
15
12
43
1.83
57146--57172
2
13.5
2
100
0
54
48
0
0
51
1.00

Tables:   1

The End!