Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005508.1 Hibiscus syriacus cultivar Beakdansim tig00012713_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77693

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
81--297
113
1.9
111
90
4
346
29
22
15
33
1.94
2519--2588
17
3.9
18
77
17
74
2
17
1
78
0.94
2578--2621
22
2.0
22
90
0
70
4
13
13
68
1.36
5750--5803
14
3.8
14
80
2
54
50
9
14
25
1.73
7456--7529
37
2.0
37
82
12
89
70
2
1
25
1.09
9591--9672
3
26.7
3
80
9
76
58
0
1
40
1.06
9591--9678
24
3.6
24
84
4
97
59
0
1
39
1.05
14904--14943
20
2.0
21
90
5
64
37
10
2
50
1.50
22452--22476
13
1.9
13
100
0
50
20
8
32
40
1.81
28092--28187
42
2.3
42
89
3
140
30
25
27
17
1.97
28198--28229
13
2.5
13
100
0
64
15
31
31
21
1.95
34099--34157
30
2.0
30
93
6
102
44
15
16
23
1.86
34535--34677
69
2.1
69
98
0
277
41
13
17
27
1.86
40192--40226
6
5.8
6
100
0
70
0
17
31
51
1.45
51880--51915
2
18.0
2
100
0
72
50
0
0
50
1.00
58914--58973
23
2.6
23
94
0
102
20
28
28
23
1.99
65389--65421
16
2.1
16
94
0
57
33
0
30
36
1.58
65855--65888
14
2.4
14
85
0
50
44
0
35
20
1.52
68840--68886
25
2.0
24
83
8
60
21
25
10
42
1.85
75609--75643
1
35.0
1
94
0
61
2
0
0
97
0.19
75592--75635
15
2.9
15
86
3
52
9
2
4
84
0.85

Tables:   1

The End!