Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005513.1 Hibiscus syriacus cultivar Beakdansim tig00012729_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61524

Tables:   1   

This is table  1  of  1  ( 44 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7305--7638
43
7.8
42
81
4
339
25
20
19
34
1.96
7291--7626
85
3.9
84
79
5
345
26
20
19
34
1.96
8857--8907
21
2.4
22
80
12
61
27
19
0
52
1.46
12280--12324
22
2.0
23
83
12
58
28
8
8
53
1.62
12805--13081
37
7.4
37
79
11
217
43
4
6
44
1.51
12845--13110
37
7.2
35
80
11
246
45
4
5
44
1.46
12845--13110
73
3.6
72
81
9
286
45
4
5
44
1.46
13083--13173
33
2.9
30
84
10
121
48
3
7
40
1.48
13139--13217
37
2.1
37
80
0
95
45
2
7
44
1.45
13256--13286
2
15.5
2
100
0
62
48
0
0
51
1.00
14251--14283
17
2.0
17
88
5
50
15
9
9
66
1.43
14296--14352
18
3.2
18
90
5
80
17
3
3
75
1.09
14310--14354
5
9.4
5
79
15
51
17
4
0
77
0.92
14296--14345
9
5.4
9
82
2
64
20
2
4
74
1.08
14310--14353
9
4.7
10
83
10
58
18
4
0
77
0.94
14382--14433
14
3.5
14
75
14
59
9
9
1
78
1.03
14382--14437
7
7.6
7
74
18
51
10
8
1
78
1.03
18004--18190
95
2.0
95
86
4
261
34
18
16
30
1.93
19403--20396
164
6.0
160
82
6
943
30
25
20
24
1.98
19403--20362
329
2.9
326
81
4
1108
30
25
20
24
1.99
19420--20362
413
2.3
411
86
4
1240
30
25
20
24
1.98
20965--20996
2
16.0
2
100
0
64
50
0
0
50
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21019--21282
35
7.2
34
78
14
167
46
3
5
44
1.44
21021--21282
37
7.2
36
76
16
186
46
3
5
44
1.44
21158--21251
40
2.5
37
88
11
145
43
3
4
48
1.38
21247--21349
33
3.2
32
85
8
136
51
2
5
39
1.41
21229--21349
33
3.5
34
82
8
122
49
3
4
42
1.40
21376--21412
9
4.1
9
89
0
56
16
0
0
83
0.64
21382--21411
15
1.9
16
93
6
53
13
0
0
86
0.57
21415--21457
2
21.5
2
100
0
86
48
0
0
51
1.00
22461--22517
18
3.2
18
90
5
80
17
3
3
75
1.09
22475--22519
5
9.4
5
79
15
51
17
4
0
77
0.92
22461--22510
9
5.4
9
82
2
64
20
2
4
74
1.08
22475--22518
9
4.7
10
83
10
58
18
4
0
77
0.94
22550--22601
14
3.5
14
75
14
59
11
7
1
78
1.02
22550--22605
7
7.6
7
74
18
51
12
7
1
78
1.02
23482--23545
30
2.1
30
100
0
128
50
4
7
37
1.52
23722--23759
15
2.5
15
91
0
58
2
39
28
28
1.70
32305--32364
20
3.0
20
80
2
66
36
15
23
25
1.93
49206--49290
31
2.8
31
75
10
86
47
7
15
30
1.72
49628--49689
29
2.1
30
84
3
81
37
4
22
35
1.76
49758--49791
17
1.9
18
88
5
52
29
2
32
35
1.73
59708--59764
24
2.4
24
81
16
66
47
0
1
50
1.11
60229--60306
31
2.5
31
89
0
111
25
24
14
35
1.93

Tables:   1

The End!