Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005514.1 Hibiscus syriacus cultivar Beakdansim tig00012735_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52520

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3011--3051
16
2.7
15
85
10
57
29
0
0
70
0.87
3767--3806
21
1.9
21
100
0
80
45
7
20
27
1.78
4391--4433
22
2.0
21
86
8
61
32
18
9
39
1.83
16858--16899
21
2.0
21
85
0
57
38
28
7
26
1.82
17760--17793
17
2.0
17
88
0
50
29
0
8
61
1.26
27689--27746
23
2.6
23
94
5
102
44
12
3
39
1.58
28940--29295
42
8.6
42
86
6
478
26
21
18
33
1.96
28894--29295
83
4.8
83
87
2
549
28
20
18
32
1.96
28940--29295
167
2.1
166
91
3
565
26
21
18
33
1.96
29348--29458
58
1.9
58
96
0
204
33
8
30
27
1.86
33872--33921
21
2.4
20
83
9
64
20
2
20
58
1.50
33890--33930
21
2.0
21
90
0
64
19
2
24
53
1.57
34129--34310
43
4.3
43
80
4
172
27
23
19
29
1.98
38728--38796
20
3.5
19
76
9
68
31
15
13
39
1.86
46897--46971
20
3.8
19
75
5
69
30
13
10
45
1.77
49968--50087
54
2.2
54
88
2
170
22
19
28
30
1.98

Tables:   1

The End!