Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005515.1 Hibiscus syriacus cultivar Beakdansim tig00012738_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67919

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4771--4825
25
2.2
25
100
0
110
41
10
16
30
1.83
5446--5516
22
3.0
24
76
16
76
42
1
5
50
1.34
5778--5892
40
2.8
42
79
11
123
28
20
25
26
1.99
12743--12784
17
2.5
17
100
0
84
40
9
30
19
1.83
14342--14402
23
2.8
23
75
7
65
22
36
22
18
1.95
14383--14422
21
1.9
21
89
0
62
25
40
25
10
1.86
19204--19243
19
2.1
19
95
0
71
47
27
5
20
1.70
22290--22332
21
2.0
21
100
0
86
58
23
9
9
1.58
26100--26194
42
2.3
42
86
0
127
35
16
16
30
1.92
26142--26363
121
1.8
122
88
0
338
33
17
19
29
1.94
30918--30990
24
3.0
24
95
0
128
16
17
15
50
1.78
32511--32587
39
2.0
39
89
0
118
28
9
16
45
1.78
33422--33508
45
1.9
45
88
0
129
40
13
17
28
1.88
34866--34983
35
3.3
36
88
5
168
41
19
6
32
1.78
34915--34975
21
3.2
21
61
29
55
40
21
6
31
1.78
39455--39539
37
2.3
37
86
6
120
42
21
4
31
1.73
43803--43913
55
2.0
55
92
0
186
48
25
9
16
1.76
49200--49374
90
2.0
89
93
1
296
36
11
6
45
1.66
51853--51945
7
11.5
8
74
19
61
81
0
13
4
0.83
51847--51945
19
5.5
17
78
17
94
80
0
15
4
0.85
51850--51935
7
12.3
7
75
20
74
81
0
13
4
0.84
51862--51954
30
3.3
28
79
11
84
80
1
12
5
0.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51850--51944
22
4.1
22
73
15
75
81
0
14
4
0.85
53232--54357
53
21.2
53
85
1
1443
32
20
25
21
1.98
54588--54632
14
3.2
13
79
14
54
46
2
0
51
1.13
58143--58248
55
1.9
55
92
0
176
47
11
18
22
1.81
62934--62990
7
7.5
8
81
16
52
77
0
19
3
0.92
62934--62996
8
8.3
7
81
11
54
76
0
20
3
0.93
62934--63046
16
7.2
15
74
15
86
73
2
19
4
1.12
62941--63046
8
13.4
8
72
17
71
73
2
18
4
1.13
62934--62996
24
2.8
21
85
11
72
76
0
20
3
0.93
62949--63046
16
6.2
16
80
9
96
73
3
19
4
1.13
64268--64349
37
2.2
37
84
4
103
45
14
18
21
1.85
64352--64610
53
4.9
53
87
0
356
32
19
26
21
1.97
64352--65409
106
10.1
106
83
4
1267
32
19
26
21
1.97
64575--64650
40
1.9
40
88
0
116
31
22
23
22
1.98
64615--65409
53
15.1
53
85
2
1003
33
19
26
20
1.97
65611--65657
3
15.7
3
91
8
78
34
2
0
63
1.06

Tables:   1

The End!