Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005519.1 Hibiscus syriacus cultivar Beakdansim tig00012751_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71199

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3795--3857
31
2.0
31
100
0
126
23
28
6
41
1.79
9841--9870
14
2.1
14
100
0
60
73
0
0
26
0.84
13556--13617
24
2.5
24
86
2
79
22
9
16
51
1.73
13578--13631
24
2.2
24
83
6
65
22
11
16
50
1.77
13979--14009
15
2.0
16
93
6
55
51
0
9
38
1.35
17019--17078
24
2.5
24
88
0
93
18
16
15
50
1.79
17449--17480
16
1.9
17
93
6
57
53
0
9
37
1.34
20565--20637
14
5.3
14
70
14
53
53
1
1
43
1.17
20609--20645
19
1.9
19
88
0
56
54
0
0
45
1.00
20591--20651
15
3.9
15
71
21
54
60
0
0
39
0.97
20686--20745
25
2.4
25
81
10
77
60
0
0
40
0.97
20782--20856
26
2.9
25
72
16
71
50
0
0
49
1.00
20783--20834
27
1.9
28
84
7
72
55
0
0
44
0.99
23217--23257
16
2.6
16
96
0
73
58
14
12
14
1.63
28771--28804
2
17.5
2
93
6
61
50
0
0
50
1.00
37301--37329
12
2.4
12
100
0
58
37
6
27
27
1.82
40681--40768
45
1.9
46
88
2
133
27
22
19
30
1.98
42150--42219
34
2.1
32
86
5
95
22
30
15
31
1.95
42649--42696
19
2.5
19
82
0
60
31
14
12
41
1.83
42763--42820
31
1.9
31
86
13
86
41
15
8
34
1.78
52544--52579
19
1.9
18
88
5
54
27
16
19
36
1.93
55706--55758
20
2.7
20
82
5
63
49
5
0
45
1.26
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55706--55752
19
2.3
20
85
7
60
46
4
0
48
1.21
62234--62289
26
2.2
25
81
12
60
37
0
10
51
1.37
62251--62291
13
3.2
13
89
0
64
41
0
7
51
1.30
64222--65101
93
9.5
93
87
1
1147
42
13
22
20
1.87
64222--65101
232
3.8
232
85
1
1152
42
13
22
20
1.87
67492--67564
3
23.7
3
78
10
76
41
0
0
58
0.98
68944--68993
15
3.3
15
73
15
50
28
6
0
66
1.15
69882--69935
28
2.0
27
85
3
72
33
5
1
59
1.31
69899--69956
24
2.4
24
77
11
57
31
5
1
62
1.27

Tables:   1

The End!