Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005522.1 Hibiscus syriacus cultivar Beakdansim tig00012756_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55870

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11860--11921
25
2.4
26
83
5
72
69
3
4
22
1.22
11883--11924
22
2.0
21
90
4
66
69
0
2
28
1.01
11887--11928
18
2.4
17
84
15
50
69
0
2
28
1.01
11951--11994
9
4.8
9
80
5
52
75
6
2
15
1.12
13253--13283
16
1.9
16
93
0
53
9
12
29
48
1.73
14149--14211
30
2.2
27
83
8
72
42
7
12
36
1.72
27602--27678
23
3.3
23
79
0
91
19
20
23
36
1.95
29222--29257
18
1.9
19
88
5
56
27
5
5
61
1.41
29984--30059
38
2.0
38
94
0
134
31
7
23
36
1.84
30446--30533
29
3.0
30
81
6
92
39
4
19
36
1.72
32686--32742
22
2.4
23
78
18
64
61
0
28
10
1.29
34101--34134
3
11.7
3
93
6
61
67
0
0
32
0.91
34105--34133
14
2.1
14
100
0
58
65
0
0
34
0.93
34102--34134
17
1.9
17
100
0
66
66
0
0
33
0.92

Tables:   1

The End!