Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005528.1 Hibiscus syriacus cultivar Beakdansim tig00012774_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61787

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1592--1652
29
2.1
29
100
0
122
37
14
16
31
1.89
2296--2370
18
4.4
17
74
11
64
34
16
8
41
1.77
3394--3419
9
2.9
9
100
0
52
80
0
0
19
0.71
6611--6653
20
2.2
20
87
4
61
60
0
23
16
1.35
13512--13560
23
2.1
23
85
7
64
57
12
2
28
1.46
16825--16899
30
2.5
30
81
12
91
29
18
10
41
1.84
18128--18173
10
4.6
10
81
15
51
8
6
0
84
0.77
18141--18212
9
7.8
9
76
11
56
6
12
0
80
0.89
18179--18237
3
19.7
3
81
6
57
1
23
0
74
0.91
18179--18240
9
6.9
9
83
10
65
1
22
0
75
0.88
20735--20798
18
3.6
18
78
0
74
35
23
3
37
1.71
21022--21084
30
2.1
30
90
0
99
30
17
11
41
1.84
21172--21223
21
2.5
21
83
0
59
23
23
26
26
2.00
23502--23561
30
2.0
30
87
3
86
33
18
8
40
1.80
25306--25398
29
3.2
29
89
0
132
46
11
9
32
1.73
36574--36619
20
2.3
19
85
14
58
50
8
15
26
1.73
44546--44982
45
9.7
45
88
1
570
28
21
9
40
1.84
45396--45451
22
2.7
20
81
10
76
28
28
12
30
1.93
51516--51933
45
9.3
45
86
2
511
30
20
9
40
1.83

Tables:   1

The End!