Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000553.1 Hibiscus syriacus cultivar Beakdansim tig00001079_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60212

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
994--1111
43
2.8
43
89
5
172
33
13
18
33
1.90
2169--2229
30
2.0
30
93
0
104
54
11
8
26
1.64
4699--4907
75
2.8
74
80
4
237
25
5
16
52
1.66
7348--7374
8
3.4
8
100
0
54
40
11
11
37
1.76
8179--8271
32
2.9
32
96
0
168
29
19
18
33
1.95
12584--12740
32
4.9
32
90
7
257
26
18
21
33
1.96
12584--12767
63
2.9
62
87
7
264
27
17
21
34
1.95
14208--14255
21
2.3
21
92
0
78
27
4
16
52
1.62
17877--17933
15
4.0
14
82
17
73
31
0
0
68
0.90
17877--17966
15
5.9
15
71
17
69
35
1
0
63
1.02
17868--17933
29
2.3
29
84
7
82
33
0
0
66
0.92
18097--18137
21
1.9
22
85
5
57
41
7
7
43
1.60
20065--20161
3
32.3
3
100
0
194
34
0
0
65
0.93
20718--20754
17
2.2
17
86
13
51
54
0
5
40
1.24
27104--27143
20
2.0
21
85
5
55
30
5
7
57
1.48
27156--27244
43
2.1
43
82
0
106
24
0
16
58
1.38
27344--27373
2
15.0
2
100
0
60
50
0
0
50
1.00
30002--30208
105
2.0
105
80
3
238
29
16
23
30
1.96
44331--44370
21
1.9
21
89
0
62
37
7
22
32
1.82
45099--45209
53
2.1
52
89
1
177
27
16
19
36
1.93
51413--51466
21
2.6
21
96
0
99
42
12
18
25
1.86
56518--56569
24
2.1
25
96
3
97
44
7
23
25
1.79

Tables:   1

The End!